Oncorhynchus kisutch (coho salmon): 109881922
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Entry
109881922 CDS
T09179
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109881922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109881922
Spliceosome [BR:
oki03041
]
Complex A
U1 snRNP components
U1 related factors
109881922
Complex B
109881922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
109881922
NCBI-ProteinID:
XP_031643526
Ensembl:
ENSOKIG00005006084
LinkDB
All DBs
Position
LG14:complement(4460689..4497548)
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AA seq
852 aa
AA seq
DB search
MSYPPHLNRLPQLPPGICPPQFAGFPQGVPAGTPMIPVHMGIMTSAPAVMVPTTVSMVQM
PPGPRKDLNPVRVKENQEGGSGDPTTTTVFVGNISEKASDMLVRQLLAKCGLVLSWKRVQ
GASGKLQGKNKTAFGFCEYKEPESTLRSLRLLHELLLGDKKLLVKVDAKTKAQLEEWKAR
KRNANGGAKSEDGPKEEEDEEEVLDEDTKRRDQIVKGAIEGLIREYGSELNAPSQDGDNQ
PRKKKREKKEEEDINVMDMEDDKRDLISREISKFRDTHKKLEEEKGKKEQERQEIDKDRR
ERDKERERERERRDREREKEREKEKERNDNNNKERERDRDRDRERIDRDRERTRERERGD
RGERERVKERSREVSIDRSRSRERSRDEKKHDREEDQEEAYERRKLERKMRDKETAYQER
LKNWEMRERKKTRDYDKENQREDERRREMTKEGKRLKEFLEDYDDDKDDLKYYRGSALQK
RLRDREKETELDERDRKREKEEHDQIRQRLLAEGHPDPEAELQRMEEEAERRRQPPVKPV
PEEEVQQEKPNRDREHREREHRERDHHRDRRGADRPSLQHLQPQSDDDLEEGEELDDCDR
EDSSDARPNPNLKPTMRPITSAPSVSSGSGGATPNSPGNESPCGIIIPHENSPEARPTEE
QHPKIGLSLKLGASPNHQIHTGSKRKKLANVDSVFNKFGEEEADEAPRKRKLVPLDYGED
DKSLGLDGAEVPGGKGGQNTEEKRKHIRSLIEKIPTARPDLFNYPLDWTAVDSTLMERRI
RPWINKKIIEYIGEEEATLVDFVCSKVMSHGTPQGILDDVAMVLDEEAEVFIVKMWRLLI
YETEAKKIGLGK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacccccctcacctgaaccgcctcccccagttgccccccgggatttgccctccc
caattcgcggggttcccccagggagtcccagcaggtacgcccatgattccagtccacatg
gggattatgacctctgcgcccgctgtcatggttcctaccacagtgtctatggtccagatg
cctcctggccctaggaaggatctgaacccagtccgagtcaaggagaaccaggaggggggc
agtggagaccctaccaccaccacagtgtttgtcgggaacatctcagagaaggcttcagac
atgctggtcagacagctgttagcgaaatgtggcctggtcctgagctggaagagggtccaa
ggggcttctgggaaactgcaaggtaaaaacaaaacagcgtttggtttctgtgagtacaag
gagccagagtccaccctgcgttcccttcgtctgctacatgagctgttgctgggagacaag
aagctgctggttaaggtggatgctaagaccaaggcccagcttgaagaatggaaggctagg
aagaggaacgccaacgggggagccaagtctgaggacgggcccaaggaagaagaggatgag
gaagaggttcttgacgaagacacaaagcgtcgtgaccagatagtgaaaggggcgatcgag
gggttgatccgggagtacggcagtgagctcaacgcaccttctcaggacggagacaaccag
ccccgcaagaagaagagagagaagaaagaggaggaggacatcaatgtgatggacatggaa
gatgacaaaagagacctgatatccagagagatcagtaaattcagagacactcacaagaaa
ctggaggaggagaagggaaaaaaagagcaggaacggcaagagatcgataaggacaggagg
gagagggacaaagagagggagcgagagagggagcgccgggaccgcgagagggagaaggag
agagagaaggagaaggaacgcaacgacaacaacaacaaggagagagagcgggacagagac
cgggatcgagaacggatcgatcgggaccgtgaacggacgagggagagggagaggggagac
agaggagagagggagcgcgtgaaggagaggagtcgagaagtcagcatagaccgcagtaga
tccagagaacggagccgcgatgagaagaaacacgaccgcgaggaggatcaggaggaggcg
tacgaacgcaggaaactggagaggaagatgagggacaaggagactgcctaccaggaacgt
ctgaagaactgggagatgagagagaggaagaagactcgggactacgacaaagagaaccaa
cgagaggacgagagacggcgtgagatgacaaaagaaggcaagcgcctgaaagagttcctg
gaagattatgacgatgacaaagatgacctgaaatactacaggggtagtgctttacagaag
cgtctgagagaccgtgagaaggagactgagctggatgagagagacaggaagagggagaag
gaggagcatgatcagatcagacagagactgttagctgagggacacccagaccctgaggcc
gagctgcagaggatggaggaggaggcagagcggaggcggcagcccccagtgaagccggtg
ccagaggaggaggtgcagcaggagaaaccaaaccgggacagggagcaccgagagagggag
caccgagagagggaccaccacagggacaggagaggagcagacaggccttctctccagcac
cttcaaccccaatcagacgatgacttggaggaaggggaggagcttgatgattgtgaccgg
gaggactcatcagatgccaggccaaacccaaacctgaagcccacgatgcggccaataaca
tcggccccctcggtgtcgtcgggcagcggcggcgccacacccaactcccccggcaacgag
tctccctgcggtatcatcatccctcatgaaaattctcctgaagcccggcccactgaagaa
cagcatcccaagattggcctcagcctcaaactgggcgccagccccaaccatcagatccac
accgggagtaaacgtaagaagctggccaacgtcgacagcgtcttcaacaagttcggcgag
gaggaggccgacgaagcgcctcgtaaacgtaagctggttccgttggactacggcgaggat
gataagagcttgggtctggacggggcagaggtacctggagggaagggaggacaaaacaca
gaggagaaacggaaacacatcaggagtctcattgagaagatccctacagccaggccggat
ctgttcaactaccctctggactggactgctgtggactcgactctgatggagcgccgcatc
agaccctggatcaacaagaagattatagagtacatcggagaggaggaagctacgctagtg
gactttgtctgttcgaaggtgatgtctcacggcacaccgcaggggatcttggatgatgtt
gccatggttctggacgaggaggcagaggtgttcatagttaaaatgtggaggttgttgatc
tacgaaacggaggccaagaagattggtctggggaaatga
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