Oncorhynchus kisutch (coho salmon): 109881975
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Entry
109881975 CDS
T09179
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109881975 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109881975 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109881975 (vps36)
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
109881975 (vps36)
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109881975 (vps36)
Exosomal proteins of colorectal cancer cells
109881975 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DMAP1
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
109881975
NCBI-ProteinID:
XP_031664793
Ensembl:
ENSOKIG00005031248
LinkDB
All DBs
Position
LG29:46183765..46226636
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AA seq
386 aa
AA seq
DB search
MDRFTWSNGLLEMNETLVIQQRGVKLYDGEDKAKLDVGIALLSTHQLIWRDLKNHECCIA
IPLSQIIYFEEQAAGIGKSAKIVVHLHASPANKEPGPYQQSKFSYFKLSFKEHGQIEFFR
RLTEELSQKRWESTPMSQPIPTATNSQTGRTRAVGIVGIERKIEERRKETEKNSPQAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHLQLAKQLGDILLAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKQP
LRLRIFDSGVMVVQLQSHSEEEMISSALDNVTDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLFNSQA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacagattcacatggtcaaatggtcttctggaaatgaatgaaacattggtgattcaa
caacgaggtgtcaaactttatgacggagaagacaaggccaagttggatgttggaattgct
ctgctgagtactcaccagttaatatggagggacctgaagaatcatgaatgctgcatagcc
atacccctttctcagatcatctactttgaggaacaagctgcgggtatcggaaagagtgcc
aagatagtggtccacctgcacgcttccccggccaataaggagccaggaccctaccagcag
agcaagttctcctacttcaaactgtccttcaaagagcatggacagatagagttcttccgg
aggctgaccgaggagttgagccagaagagatgggagagtacgcccatgtcacaacccatc
cctacggcaaccaactcacagacaggaaggacgcgagcggtggggatcgtcggcatcgag
agaaagatagaggagaggaggaaagagacagagaaaaattcccctcaggcctttgaggac
ctcagtaagctgatggtgaaggcgaaggagatggtggagctgtccaggtccatcgccaac
aaaatcaaagacaagcagggagacatcacagaggatgagactatccggttcaaatcctac
ctgctcagtatgggtatagccaaccccgttaccagggagacgcacggctcaggtacccac
taccacctacagctggccaagcagctgggagacattctgctggcaccactagaggagcgt
ggtgggatgatggctctgactgaagtgtactgtctggtcaacagagctaggggaatggag
ctgctgtctccagaggatttggtgaatgcctgtaagatgtttgagtcgctgaagcaacca
ctgaggttgcgtatctttgacagtggtgtgatggtggttcagctgcagtcccacagtgag
gaggagatgatctcctcggccctggacaacgtaactgataaaggctctctgacagctgag
gagtttgccaagctgctcggtctctctgttcttctgtctaaagaaaggttgttactagca
gagaagatgggtcacctgtgtagagacgactctgtggaaggactacggttctaccccaac
cttttcaacagtcaggcttga
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