KEGG   Oncorhynchus kisutch (coho salmon): 109882007
Entry
109882007         CDS       T09179                                 
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like protein 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109882007 (tbpl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oki03000]
    109882007 (tbpl1)
   03021 Transcription machinery [BR:oki03021]
    109882007 (tbpl1)
Transcription factors [BR:oki03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    109882007 (tbpl1)
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109882007 (tbpl1)
  RNA polymerase III system
    TFIIIB
     109882007 (tbpl1)
  RNA polymerase I system
    SL1/TIF-1B
     109882007 (tbpl1)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 109882007
NCBI-ProteinID: XP_031656231
Ensembl: ENSOKIG00005043191
UniProt: A0A8C7KCI9
LinkDB
Position
LG21:complement(44929584..44951637)
AA seq 187 aa
MEPSNDVALDIIITNVVAVFRTRCHLNLRTIALEGVNVIYKPEYGKVLMKLRKPRITASI
WSSGKIICTGATSEDEAKQGARRLARTLQKLGFKVRFSEFKVVNVLAVCSMPFAIRLIDF
TKNNRPIASYEPELHPAATYRIKTLKATVQVFSTGSLTITGPNVQAVATAVEHIYPMLLE
CQKPLRK
NT seq 564 nt   +upstreamnt  +downstreamnt
atggagcccagtaatgacgtagcgttggatatcattatcaccaatgtggtggctgtattc
aggacacgctgccacctcaacctgcgcaccatcgctctggagggggtcaacgtaatctat
aaacctgaatatgggaaagtcctgatgaaactccgcaaacccaggatcaccgcttccatc
tggtcttcagggaaaatcatctgtaccggcgctaccagcgaggatgaggctaagcaggga
gcccggaggttagcccgcaccctgcagaaactgggcttcaaggtgaggttctcagagttc
aaggtggtgaatgtcctggcagtgtgctccatgccgttcgccatccgactcatcgacttc
accaagaacaaccggcccatcgccagctatgagccagagctccaccccgctgccacctac
aggatcaaaaccctcaaggccaccgtccaggtcttctctaccggcagccttaccatcaca
ggaccaaatgtgcaggctgtagccacggctgtagagcacatctaccccatgctattagag
tgtcagaaacccctccgcaaataa

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