Oncorhynchus kisutch (coho salmon): 109882139
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Entry
109882139 CDS
T09179
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109882139
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109882139
Surveillance factors
Other surveillance factors
109882139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
109882139
NCBI-ProteinID:
XP_020329821
Ensembl:
ENSOKIG00005033662
LinkDB
All DBs
Position
LG16:complement(19691647..19729300)
Genome browser
AA seq
1057 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFVSILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVLRLMGKGGGVAPAGVARGRGT
TRGGGRGRGRGESGGFYQRSIEEGEVGFGRGAREIHRSQSWDDRGERRFEKPVRAREGVR
VGFEEATGVPVPGVPRKDYTRSDSENWRSLREEQEEDEEEGGDPGGSWRLAGARRLDDGG
PKSAGWREHDGQVEGRRRKFEFDFGGGRRRAGSEGLEDDRDGLPEWCTDEEGEMGTFDAS
GAFLPISKGGKEDELDFQGIEEEEEGEESLSDMKRIMNGGQRVDVKDSAGTSPSSSSPPG
PLSAPPALALNPPMPQLSLTVAELEASQMANSHPVPVLVKASKMPSEVLEGSPAGSSTTQ
QSPSTTSSLPSPPPSSSAANHLSLPPGGDTEDDEGMKHLQQEAEKMVASLQDTSLEEESF
TQTLQESRNTASALPLSHDAAMKWFYKDPQAEIQGPFTTLEMCEWFQAGYFSMSLLVKRG
CDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRPPPPRPQPLPPRGSAGSMDQDRLKKQQE
QAAAVLYQQLQQQQQLFQLISRCGEQGILPSVNRSMSVPDTGSMWDMHTSASQQSGGEAS
LWDLTMNSSTQGPTLEQLQKLQQERREAELRAKREEEEQRKRREEKRRQQEEQKRREEEE
IFRRKQCRQQQELIMKLLQQAPQQGSGSGVGSGWGTGGLNKSGAKGLSLLDMQEAERLLK
QQQRAQQQQQRERHQGLSMGGSSMGQWGDGGAVTGSLWGGGGGMEGKAGGGMGLWDEAVK
NQTRSSSMQGLKNSRSSPSLSEQYMLSCRKQRTDEEDKLLKLLQGIKTPQDGFTTWCEQM
LHALNTQANNTSSPLDVSTIVAYLKEVESPYEVHDFIRSYLGDTMEAKEFAKHFLERRAK
QKQNLQRQQQQLSKEVAGLAMSNFPLPDSMRGVSPSTLQSMFQAAQMGKGGLYDTQGAMK
KKKQPVVLHSDPSILGYSYHNAGERLSLNEMEMVEDY
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggccccgaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccggaggacatg
caggataaggagtttgtgtctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctcaatgtctgtgaacagtgtggctgtgctg
aggctcatgggtaaaggagggggagttgccccagcgggcgtggcccgaggcagaggcacc
acgcgaggaggaggcagagggcgaggtcgaggcgagagtggaggattctaccaaagaagt
attgaggagggagaggtaggcttcggccgtggagccagagagatccaccgcagccagagc
tgggacgacaggggcgagaggcgttttgagaagcctgtgcgtgccagggagggggtacgt
gttggcttcgaggaggcgactggtgtccctgtgcctggggtaccaaggaaggactacacg
cggtcggacagtgagaactggcgtagcctccgagaggagcaggaggaggacgaggaggag
gggggcgaccccgggggcagctggagactggccggagcacggagattagatgatggcggt
ccaaagtcagcaggctggcgggagcacgacggtcaggttgaggggcgtcgcaggaagttt
gagtttgacttcggcgggggtcgcaggcgggccggcagcgaggggttagaggacgacaga
gacggactgcctgagtggtgcactgatgaagagggagagatgggcaccttcgacgcttcc
ggagccttcctacccatatccaagggaggaaaggaggatgaattggacttccagggaata
gaagaggaggaagaaggggaggagagtctttctgacatgaagaggatcatgaatggagga
cagagagtcgatgtaaaggattccgctggtaccagtccctcttcctcctctccccctggc
cccctctctgcccctccagctctggctctcaacccccccatgccccagctgtccctcacc
gtggctgagctggaggcctctcagatggccaacagccaccctgtccctgtccttgtcaag
gccagcaagatgccaagtgaagttctcgagggctctccagcagggtcctccaccacccaa
cagagccccagcaccacctccagtctgccttcaccccctccctcctcctctgctgctaac
catctctccctgccaccggggggcgacaccgaggacgacgagggcatgaagcacctgcaa
caggaggcagagaagatggtggcgtccttgcaggacacgtctctggaggaggagagtttc
actcagacactgcaggagagcagaaacacagcctccgccctgcccctctcccacgacgct
gccatgaagtggttttataaggacccccaggcagagatccagggtccattcaccactctg
gagatgtgcgagtggttccaggcgggctacttctccatgtctctgctggtgaagaggggc
tgtgacgagggcttccagccgctgggtgacgtcatcaagatgtggggacgcgtgcctttc
gcccccgggccctccccgccgcccctgctggtgagacctccaccgccacgccctcagcct
ctaccgccccgggggtctgctggtagcatggatcaggaccgtctgaagaagcagcaggag
caggcagcagcagttctctatcaacagctccagcagcagcagcagctattccagctcatc
agcaggtgcggagagcagggtattttgccttcggtgaacaggtcgatgtcagtgccagat
acagggtccatgtgggacatgcatacctcagcttcacagcaatcaggcggtgaagccagt
ttatgggacttaacaatgaattcttcaactcagggtccaactctcgaacagcttcagaag
ctccagcaggagaggagagaagctgaactcagggcaaagcgcgaggaggaggaacagcgc
aagaggagggaagagaagaggaggcagcaggaggagcagaagaggagggaggaggaggag
atcttcagacgcaaacagtgtcgccagcagcaggagctgatcatgaagctgctccagcag
gccccccagcagggctcaggctctggggtggggtctggctggggcactgggggtctcaac
aagtcaggggccaagggcctcagtctgcttgacatgcaggaggcagagaggcttcttaaa
cagcagcagagagcccagcagcagcagcagagagaacgtcaccaaggcctgtcaatgggg
ggttcctccatgggtcagtggggggacggaggtgctgtcacgggcagcctgtggggaggc
ggaggggggatggagggtaaggctgggggcggcatgggtctgtgggacgaggcagtgaag
aaccagaccagaagtagcagcatgcagggactgaagaacagccgcagcagcccctcactc
agtgagcagtatatgctgagctgtaggaagcagcgtacggatgaggaggacaagctgctg
aagctgctgcagggcatcaagacgcctcaggacgggttcaccacctggtgtgaacagatg
ctgcacgccctgaacacccaagccaacaacacctcctctccactggacgtgtccaccatc
gtggcgtacctgaaggaggtggagtctccctacgaggtccatgactttatccgctcctac
ctgggagacaccatggaagccaaagagttcgccaagcacttcctggagcgccgtgccaaa
cagaaacagaacctgcagcggcagcagcagcagctatcaaaggaagtagcagggctggcc
atgagcaacttccctctgccggactccatgaggggagtgagccccagcaccctgcagtcc
atgttccaggccgcccagatggggaagggagggctgtacgacacccagggggccatgaag
aagaagaaacagcctgtggtgctccactctgaccccagcatcttagggtactcataccac
aacgcgggcgagcgtctgagcctgaatgagatggagatggtggaggattactga
DBGET
integrated database retrieval system
