Oncorhynchus kisutch (coho salmon): 109882446
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Entry
109882446 CDS
T09179
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109882446
03036 Chromosome and associated proteins [BR:
oki03036
]
109882446
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109882446
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109882446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
Stm1_N
zf-C2H2_6
zf-C2HE
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
109882446
NCBI-ProteinID:
XP_031686852
Ensembl:
ENSOKIG00005050634
LinkDB
All DBs
Position
LG8:complement(67706197..67716837)
Genome browser
AA seq
768 aa
AA seq
DB search
MEGEVVSIETAQVEGLQDSGEGPELLQTVEAALMEGGVAPQVVTGNVEMMVMDTLDSTLD
PALLQMKTEVLEGGGTVTVTGGDDGQIITLQVVNMEGNMEQTSAALGLGQLQLVQVPVTT
ATVEELQASFVDASAGNTEAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAQDEL
QVTHGEEEEEEAEPQVEDQTWSKDPDYQPTTGIRKGKKGKKSRLRYGEGERDMDVSVYDF
EEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSH
TDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDCDMAFVTSGELVRHRRYKHTFE
KPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYE
CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFMEMGRK
CRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQERHMIMHRRTHTGEKPYACSQC
EKTFRQKQLLDMHFKRYHDPNFIPTAFVCSKCAKTFTRRNTMLRHAENCNGENTGDENGT
PPRKGRRGRKRKMRSRRDDDDDDTEPELDDIEEEEEELLAEIEVEQAPPVVPVPAPVGPP
AKRKRGRPPKAKPAPTAAIIRVEDETTGEVDDIIVKKEMKAEQASQEEEAVEDEVPAVEV
EHAEGEPANQVEESFQGEEVVQEVALSVTEAPPNGDLTPEMILSMMDR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaagtcgtttccattgagaccgctcaggtcgagggtctccaggacagtggg
gagggacccgagctgctccagactgtagaggctgccctgatggaagggggtgtggcaccc
caagtggtgacagggaatgttgaaatgatggtgatggacaccctggactcaacccttgac
cctgccctgctacagatgaagactgaggtcctcgaagggggtggcacagtgacggtcacc
gggggagacgatggacagatcatcaccctgcaggtggtgaacatggaggggaacatggag
cagacaagtgcagcattggggcttggacagctgcagctggtgcaggttcctgtcactaca
gccaccgtggaagaactccaggccagctttgttgacgcctctgcaggcaatactgaggca
gagccagtgatctgccacactctccctctgcccgagggcttccaggtggtgaaggtgggg
gcgaatggagaggtggagacagttgagcaggaagaactgcaggcagcccaggatgagctc
caggtgacccatggggaggaggaggaggaggaagctgagccccaagtagaggaccagacc
tggtccaaagacccagattaccagccaactactggcatccgcaaggggaagaagggcaag
aagagccgcctgcgttacggggagggggaacgggacatggatgtgtctgtatacgacttt
gaggaggaacagcaggaggggatgctctctgaggtcaacgctgagaaggttgtgggcaac
atgaagccgcccaaacccaccaagataaaaaagaaaggtgtgaagaagacgttccagtgt
gagctgtgtagctacacctgcccccggcgctctaacctggaccgccacatgaagagccac
acagatgagaggccacacaaatgccacctgtgtgggagggccttcagaacagtcacactg
ctgaggaaccacctcaacacacacacaggcactcgtcctcataaatgccaagattgtgac
atggcatttgtgaccagtggagagctagtgcgtcatcgtcgctacaaacacacattcgag
aaacccttcaagtgctccatgtgtgactacgctagtgtggaggtgagtaagctgaagaga
cacatccgctcccatacaggcgagaggcccttccagtgcagtctgtgcagctacgccagc
cgagacacttacaaactgaagagacacatgaggacacactcgggtgagaagccatatgag
tgctacatctgccatgctcgtttcacgcagagcggcaccatgaagatgcacatcctgcag
aagcacacagagaatgtggccaaattccactgcccccactgtgacacagtcatcgctcgc
aagagcgacctgggtgtgcacttgcggaagcagcattcgttcatggagatgggcaggaag
tgtcgttactgtgacgctgtgttccacgagcgttacgcactcatccagcaccagaaatcc
cacaagaacgagaagcgcttcaagtgcgaccagtgtgactattgctgcagacaggagcgt
cacatgatcatgcacagacgcacacacacaggggagaagccgtacgcctgcagccaatgt
gaaaaaactttccggcagaagcagctgctggacatgcacttcaaacgttaccatgatccc
aatttcatccccactgccttcgtctgcagcaagtgtgccaagaccttcactcgcaggaac
accatgctgcgtcacgcagagaactgtaatggagagaacaccggcgacgagaacgggacc
ccgcccaggaaaggccgccgcggcaggaagaggaagatgcgctccagacgggatgacgac
gatgatgacaccgagcctgaactggatgacattgaggaagaggaggaggagctgctagct
gagattgaggtggaacaggcaccaccggttgtccctgtccctgcccctgttggcccgcca
gccaagaggaaacgtggaagacctccaaaggctaaacctgccccaacggcggcaatcatc
cgtgtggaggatgagaccacaggcgaggtggatgacatcatcgtgaagaaagagatgaaa
gccgagcaggcgagccaggaggaagaagctgttgaggatgaggtgccagcagtagaggtg
gagcatgctgaaggagagcctgccaatcaggtagaagagtcattccagggggaggaggtg
gtgcaggaagtggcactgtctgtcacagaggctccgcccaacggtgacctcactcctgag
atgattctcagtatgatggaccggtga
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