Oncorhynchus kisutch (coho salmon): 109882569
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Entry
109882569 CDS
T09179
Name
(RefSeq) nectin-1-like
KO
K06081
poliovirus receptor-related protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03266
Virion - Herpesvirus
oki04514
Cell adhesion molecule (CAM) interaction
oki04517
IgSF CAM signaling
oki04520
Adherens junction
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
109882569
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109882569
04517 IgSF CAM signaling
109882569
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109882569
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109882569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109882569
04090 CD molecules [BR:
oki04090
]
109882569
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
Nectin family
109882569
CD molecules [BR:
oki04090
]
Proteins
109882569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
I-set
ig
Ig_PVRIG
TM_ErbB1
C2-set_3
DUF4786
Motif
Other DBs
NCBI-GeneID:
109882569
NCBI-ProteinID:
XP_031651229
Ensembl:
ENSOKIG00005029852
LinkDB
All DBs
Position
LG18:1524322..1798195
Genome browser
AA seq
499 aa
AA seq
DB search
MAMLATVWIVLLAVNIQAGDGQSVQMDSIKSGFVGSQVELRCIFVNSNPPVKISQVTWQK
FLNGTKQNVAIANPSLGVSVLPPFKERVTFKQAAVRHRTPSLEDTTIMFSNLRLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPLTRMTLTTPTIVARPQKRKMTVATCLSANGKPQSVI
KWDTRLKGEATFQETQNSNGTVTVRSNYVVVPSRETHKQKLTCIVTYRNERITDSVVLNV
QYEPEVKIEGFDGNWYLNRQDVSLTCNTDANPPVTVYQWKLLNGSLPSTVEIRNNSLIFK
GAVTYELAGTYVCDATNGIGTRTGLVEVNVTEFPNNPPPGGREIPQEQHNAGAVIGGAVG
GVVLLAAAATLLFVFLRRRQRTFKGDYSTKKQVFGNGYSKAGGLPAHPPIPNNLQYPDDS
DDEKKPTQIAVTGGFEASERDFDGDTEDLKRPYFTVDEGESQDYDERTLAFQYNPGPDIA
DDMVSQTDGSVISKKEWYV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttggcgactgtttggatagtccttctggctgtcaatatacaagctggagat
ggacagagtgtccagatggactccattaagtcaggcttcgtgggctcccaggtggagctg
cgttgtatcttcgttaattccaaccctccagtcaagatctctcaggtgacgtggcagaag
ttcctgaacggcaccaaacagaacgtggccatcgccaacccgtcgctgggggtgtccgtg
ctcccgcccttcaaggagagggtgaccttcaagcaggctgcggtccgccaccgcaccccg
tctctggaggataccaccatcatgttctccaacctgaggctgtctgatgaggccgcatac
atctgcgagtacaccaccttccctgctgggaaccgagagaacatggtcaacctcaccgtg
tttgcgcgacctctgacccgaatgaccttgaccacgcctaccatcgtggcccgcccccag
aagcgtaagatgactgtggcgacatgcctctcggccaatgggaagcctcagagtgtgatc
aagtgggacacgaggctgaagggtgaggccacgttccaggagacgcagaacagcaacggc
acggtgaccgtccgcagtaactatgtggtcgtgccgagcagagagacacacaaacagaaa
ctcacctgcatcgtaacctaccgcaacgagaggattacagacagtgtcgtgctcaacgtg
cagtatgaaccggaggtgaagatcgagggttttgatggtaactggtacctgaaccgtcag
gacgtcagcctcacctgcaacactgacgctaacccccctgtcaccgtctaccagtggaaa
ctgttgaatggatctcttcccagcaccgtggagattcgtaacaactctctgatcttcaag
ggggcggtgacctatgagctagctggaacatacgtgtgtgatgccaccaatgggatcggg
actcgtacaggtctggtggaggttaacgtcactgaattccctaacaacccgccacctggg
ggccgtgagatcccgcaggagcagcacaatgcgggtgccgtcatcgggggcgccgtgggc
ggggtcgtcctgttagcggcggccgccaccctgctctttgtattcctgcgccgccgccag
cgcaccttcaagggcgactacagcaccaagaaacaggtgtttgggaacggctacagcaag
gccgggggcctgccagcccaccctcccatccccaacaacctacagtacccagacgactca
gatgacgagaagaagcctacccagatcgctgtgaccggagggttcgaggcgagcgagcgt
gattttgacggagacacggaggacttgaagaggccctatttcacagtggacgaaggagag
agtcaagattatgatgaacggactctcgctttccagtacaaccccgggccggatatagcc
gatgatatggtgtcccaaaccgatggctctgtcatttcaaagaaagagtggtatgtgtag
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