Oncorhynchus kisutch (coho salmon): 109882649
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Entry
109882649 CDS
T09179
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109882649
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
109882649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
RhoGEF
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
109882649
NCBI-ProteinID:
XP_031661666
Ensembl:
ENSOKIG00005040413
LinkDB
All DBs
Position
LG26:complement(50191296..50279380)
Genome browser
AA seq
1785 aa
AA seq
DB search
MMEYQKSPVKEESSRERGLLHLWRGYSSSVTPERVLLSRPVLQAALGISHGILLAEGGLV
YSFGDLTWRQGLRVPPTYPLLESVLSGQCVVSVAAGSFHCGAVTREGAVYMWGENSSGQC
GLSERGLVPDASLVSMVDSEAVPPQIIRILEVTCGEQHTLALSTQHEVWAWGSGCQLGLV
TSVFPVWRPQKVEHLAGRHVVQVACGGYHSLALVRRFPAQDSQFPRPTATDKCSQCNQLL
FSMVDQEDHVIISHSHYCPLGIELADSKPGSCSRSRQASPARQASQSRQASPARQASLAQ
RHRASACPLSQTVSLDLGLDPDLAQDPDPIIGPEYLFPGDTDSSLRESGSKEQTNQEDTG
TSDLQRQGPGTLTETDSNSAQTQARRKTSSSTDKKELKEYLKRTSDHILSEQNDNNNTGN
PITLANQTTGDSLSLANQTAEDSLTLANETAEDSLTLASHSSGDLLTLVSHVPGQCLNGD
LPDQDQPSTLTPYLLPQSTDDTTMASSLSCSLLENYTGALVMEHTLALTGRAASASPFEV
NTPLGIGSTSRLCDSSKSEGCIPVAGLCEALSGPVMAYRKTNQEVRLCMEEDSLQGKKCS
SLTDILLEEVIEGSRRHSLPPLLSHASPELPGRRSARSRPNVPRKEEVVESLPSLNTEVW
SWGRGQEGQLGHGDQLPRLQPLCIKSLNGEEVVKVAAGTHHSLALSAQCQVFSWGSNRSG
QLGHMNSPTTMPQQAKMSKGLRVWDLAAGQSHSVFLADGDCCQPILCYSGQQVMETTPEN
HIPGTGSTESSPSRTDTYTLRPVLLPFCVNMGYISSVYGGGQSCLAQADLNVMGFISALH
ELAAADRKYYCRLRDVNKRVVSPLLKKESVCTVLGQTSSLLFQSLASSYSRLCHLTGQHS
VSLTAFLHTDRDVKGLVILKHANTFLDMYKEYCGSVGNFLVMGGFQALMKPSVECFGKKF
EVLRQLSESSEDKVPLLDLLVLLFYSPMQHIHEYARLLLKLATCFDVSTVEYQRLQEGCS
KYEALSLSLGRKRKEAETTNQFWRTYSGKTTDVLRNPQRRLVYESSNKSLTLQNAGRFSV
NWFILFNDALIHAQGTIPSKSFFSSHHVYSLATLWVEPITASRNLYGIKVTTPEESFTLI
ASSAQEKAKWLRAINQAVEAVLTGEGSGPGVPAVSRTASYIFYKDLRLKDASYSGRWLSG
KPHGKGIMKWPDGRKFTGTFKQGLEDGYGDGIMPNKILNKSDRYQGHWRDGKMHGFGTYR
YATGQVYEGSFHENIRQGHGMLSSGKLIGSSSSVFVGQWLQDKKMGYGVFDDITRGEKYM
GLWSDDQRQGSGVVVTQFGLYYEGTFSDNKMMGTGLLVSDDDTAFEGEFSEDWTPNGKGY
LSMSNGDSIEGLFSGEWTSGLKITGTYMKPNLYEPDKKQSTRGLELGRLAVSPEQKWKAV
FSECWSRLGCEAPGQPEERMRAWENIAVTLTTGRRDSPELLSRSQSRVLEKLEVIPQHTG
PVTTGGYDVIQRYLTKACETPLHPLGGLLETLVTVYRITYIGVGSNRRLLQQAVEEIRSY
LIRIFQLVRFLFPDLPDEGGVIHPDPKGSSETDQQGLVVSSSTLLLPVLLPRLYPPLFTL
YALDKEREEEVYWDCVLRLNKQPDLGLLAFLGVLQKFWPVSVSVLGEKQQVLPSTKNACF
ASAVKTLQQISTTFTPSDKLQVIQRTFEELNQEVQALLEGNFLLSMDDLLPLFLYVVLRA
RMRNLAAEVSLIEDLMDPYLQHGELGLMFTTLKACCFQIQQEKTT
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtaccagaagagcccagtgaaggaggagagctccagagaacgaggcctgctc
cacttatggagaggctacagcagtagtgtgacccccgaacgagtgcttctgtcccggcca
gtcctccaggctgccctcggcatcagccatggtatcctcctggccgaaggtgggctggtg
tacagcttcggggacctgacgtggcggcagggcctgagggttcctcctacttaccctctc
cttgagtctgtcctctctggtcaatgtgttgtgtctgtagctgcaggctccttccactgt
ggcgccgtcacacgggaaggggctgtgtacatgtggggagagaactcctcggggcagtgt
ggtctgtcagagagaggcctggtcccagatgctagcctcgtcagtatggtggactctgag
gctgtccctccacagatcatcaggatcctggaggtaacctgtggggagcagcacactctg
gctctgtctacccagcatgaggtgtgggcctggggcagcggctgccagctgggtctggtc
accagtgtgttccctgtgtggagaccccagaaagtggagcacctggctgggaggcacgta
gttcaggtggcgtgtggaggataccacagcctggccctggtgcgacgcttccctgcacaa
gactctcagttccctcggccgacagctactgataagtgttcccagtgcaaccagctgctc
ttctctatggtggatcaagaggaccatgtcatcatcagccacagccactattgcccccta
gggattgagttggctgatagcaaaccagggagctgctcgagatccagacaggcctcccca
gccagacaggcctcccaatctagacaggcctccccagccagacaggcctctctagcccag
agacaccgagcctctgcctgcccgctctctcagacagtcagccttgatctgggccttgac
ccagacctagcccaagacccagaccccattataggcccagaatacctatttcctggtgac
actgacagttctctcagagagtctggctccaaagaacaaactaaccaagaggatactggt
acctctgaccttcaaagacaaggccctgggactttgacagagacggacagtaactcggct
caaacacaggcgaggaggaaaacctcatcttcaaccgacaagaaggaactgaaggaatac
ctcaagagaacgtctgatcacatcctgtctgaacagaatgacaataacaacacagggaat
ccaatcaccttagccaatcagacaacaggggattcactctccttagccaatcaaacagca
gaggattcactcaccttagccaatgaaacagcagaggattcactcaccttagccagtcat
agctcaggagatctactcaccctggtaagtcatgtcccaggacagtgcctaaacggcgac
ctacctgatcaagaccaaccttctaccttaacaccatatcttctaccacaatctacagac
gacaccaccatggcatccagcctatcatgttcactactagagaactacacgggtgcctta
gttatggaacataccttagccttaacgggccgtgctgcctcagcctcacccttcgaggta
aacacccctttaggcatcggctccaccagcagactctgtgactcatctaagagtgaaggg
tgtatcccagtcgcagggctgtgcgaggctctgtctgggcctgtcatggcatacaggaag
accaaccaggaagtgcgtctctgtatggaggaggactccttgcaagggaagaaatgctcc
agtctgactgatatcctgctggaggaggtcatcgaggggagtagacggcactcactacct
cctctcctctctcatgcatcccctgagctccccggcaggaggagcgcccgctccaggccc
aatgtgcccaggaaggaggaggtagtggagtctctgccctccctgaacacagaggtgtgg
agctggggccgggggcaggagggacagctgggccacggagaccagctacccaggctccag
ccgctgtgtatcaagagcctgaatggagaggaggtagtgaaggtagcggcaggaacacac
cactctctggccctttctgcacagtgtcaggtgttttcgtggggcagcaacagatccggc
cagttgggacacatgaacagccccactaccatgcctcaacaggccaagatgtcaaagggt
ctgcgtgtgtgggacctggcagctgggcagagccacagtgttttcctggctgatggtgac
tgctgccagcccatcctctgttacagtggtcaacaggtgatggagaccacacctgagaac
cacatacctgggaccgggtcaactgagagctctccgtctagaactgacacgtacaccctc
agacctgtcctactgcccttctgtgtgaatatgggctacatcagcagtgtgtatggcgga
ggacagtcctgtctagcccaggctgacctcaacgtgatggggttcatctctgctcttcac
gagctggctgcagcagacaggaagtattactgcaggctcagagacgtcaacaagcgggtg
gtcagccctctactgaagaaagagtctgtgtgcacggtgttgggccagacgtccagcctg
ctgttccagtccctggctagtagctacagcaggctctgtcacctgacaggacaacactcc
gtttcccttacagccttcctccatactgaccgggacgtcaagggactggtcatcctgaaa
cacgctaacaccttcctggacatgtataaagagtactgtggctcagtgggtaatttcctg
gttatggggggattccaagccctcatgaagccctctgtggagtgttttggtaagaagttt
gaggttttgcgacagctgtcagagtccagtgaagacaaggttcctctgttggacctgttg
gtgttgctgttctactctcctatgcaacacatccacgagtacgccaggctgctgctcaaa
ctggccacctgtttcgatgtgagtacagtggaataccagaggctgcaggagggctgctcc
aagtatgaggcgctgtctctcagcctggggaggaagaggaaggaggcagagacaacaaac
caattctggaggacatattctgggaaaactactgatgtcctccgtaatccccagcgcagg
ctggtgtatgagagtagcaacaagagcctgaccctccagaacgccgggaggttctctgtt
aactggttcatcctgttcaacgacgctctgattcatgcacagggtaccatcccctctaag
agctttttctcatctcatcatgtctactccctggctactctctgggtggaacccatcact
gccagcaggaacctgtatggaattaaggtgacaactccagaggagagcttcactctgata
gcatcctcagctcaggagaaggctaagtggctgagggctattaaccaggccgtggaggcg
gtgttgaccggagaggggagcggtcctggggtccccgctgtctctcgtaccgcctcctac
atcttctacaaagacctacgtctgaaggatgcctcctactcaggccgctggctgtctggc
aaaccccacggcaaagggatcatgaaatggccagatggcagaaagttcacagggaccttt
aaacaaggactggaggacggctatggagacggtataatgccaaacaagatcctcaacaag
agtgatcgttaccagggccactggagagatgggaagatgcatggctttgggacatacagg
tatgctacaggccaggtgtatgagggatccttccatgagaacatccgtcagggccatggg
atgctgagctctgggaagctgattggctcttcttccagtgtgttcgttggccagtggctt
caagacaagaagatgggatatggagtgtttgatgacatcactagaggagagaagtacatg
ggcctgtggtctgatgaccagcgacaaggcagtggtgtggtagtcactcagtttggtctt
tactatgaagggaccttcagtgacaacaagatgatgggtactggtctgctagtgtctgat
gatgacacagcttttgagggagagttctcagaagactggacccctaatggcaagggttac
ctgtccatgtccaatggagactccatagagggtctgtttagtggagagtggacctcaggg
ctgaagatcacgggaacctacatgaagcctaacctctatgaacctgacaagaagcaatca
accagggggcttgagttgggccgtctagccgtatccccagagcagaagtggaaggcagtg
ttctcagagtgttggagcaggctgggctgtgaggccccgggacagcctgaggagagaatg
agggcctgggaaaacatcgctgttacactcaccacaggacgcagagacagtccagagctg
ctgagcaggtctcagagtcgagtcctggagaaactggaggtgattcctcaacacacaggt
ccagttactactggggggtatgacgtcatccaacgatacctcaccaaggcctgcgaaacc
cccctccacccgttgggggggttactggagaccctcgtgactgtgtacaggattacctat
ataggggtaggatctaacagaaggttgctacaacaggctgtggaagagatcaggtcctac
ctcatacggatcttccagctggtcaggtttctgttccctgacctccctgacgagggaggt
gttattcaccctgaccccaaaggatcctcagaaacagaccagcaaggcttggtggtgagt
agctccactctcctactaccagtcctgctgcccaggctgtaccctcctctgttcaccctg
tatgccctggacaaggagagagaggaggaggtgtactgggactgtgtcctgaggctcaac
aaacagcctgacctgggcctgttggccttccttggggtcctacagaagttctggccggtc
tccgtctccgtgttgggagagaagcagcaggtccttcccagcaccaaaaatgcttgcttt
gcttctgcagtgaagactttacaacagatcagcaccaccttcaccccgtcagacaagctg
caggtgatccagcgtacctttgaggagctgaaccaggaagtacaagctctgctagagggg
aacttcctgttgtccatggatgacctcttacctctgtttctctacgtggtgcttagagca
cggatgaggaacctggctgctgaggtgagtttgatagaagatctaatggacccctatctg
cagcacggagagctgggactcatgttcaccacactcaaggcttgctgttttcagatccaa
caggagaagacgacatag
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integrated database retrieval system