Oncorhynchus kisutch (coho salmon): 109882663
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Entry
109882663 CDS
T09179
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109882663
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
109882663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
109882663
NCBI-ProteinID:
XP_020330351
Ensembl:
ENSOKIG00005038962
LinkDB
All DBs
Position
LG13:complement(7653733..7679658)
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AA seq
1076 aa
AA seq
DB search
MVHVYNCHPFASQQIVPTEQEPGLVCCGGGALFVVSAGGCKIEAFQLGEEGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNAPYLRAYTNWRYQAAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
IIHLPGLSPQQVGMDVAICAGYIALQTELEVLVVKLERLPGAAFTQKSADKKPQDHSLVP
QDMIPGAEHDNETEGRREGLAGHRDHDDFFIFPKHQELLGDRAKDCGVKISLEWTGMESE
ARGNFIITYILYRRFAPDFFQDCSVEETHLHSLQFHPVFTSNQEVCVEGVRGVEPTCLFC
FFSLPKTGYLYSVRGGVQMVSAYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCAAVAAR
AEDPYIDTTMKACPPITMELCALRIQLFIGLKALCHYRHHIVLLTTADVETREDTERTAR
RVIEYKDHQTLRGIFLAVGIEPSTTPALKRFLAHSFLNRKSPFTKPQNPSEMGHGWNLYV
VNTVPPLQLYNEMVEYSKTYEETNPLSHSRLHLLSEAHLLLRATLLDPRVGNPVERPQTT
GQNLAQALGYNTTRTADRQELQQAFQESCAQLGDCFSRFDKRDCHLALPYYKMSGLSLTE
VISRNRGLSNSLCGYGKGFLFFLKHSLYEETLELLTEETANEVLDIFGVAEPSQLPHVIA
SPSMARASPDCGLAHLERLESIGAPSVPLTLSKAALALRMADLQLYRQHMDRHTEMLQVY
GFIEEAKLLLHGRGDTVVPTLLARHLRDNQDGLLVAAMVALHENDKVKLDEADLFFQELC
GDVSGPQGGPQLLVDFWEALLMASSQEAVIQELLFRLTTVYIDRVTRRDGRGFKPLKSAD
DLINWCSHYGALYPWVSILTPAHFNIIPEDLHKLQSLLCGPTLDASSILPLLEQLPDEDN
AGLSVHVLCATKLGHYESSIERLLDRCPQAIIPYANHELQNNNMALWWQKLFPELCERTR
ATQGENTILLAALKETLVVVAMELNPLEFLDLLPDDGTVHFFLPHLLECSQRNLMM
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccaccctttcgcttcccagcaaatcgtgccaaccgagcag
gaaccggggttggtgtgctgtggcgggggtgccctattcgtggtgtccgctggaggatgc
aagatcgaggcttttcaactgggagaagaggggtgtcctctcatctgccgcttcgccact
atggggactgtgcagagcatcctacacagtgagataggggactacctggtgaccatcgag
gagaagaacaacgccccctacctacgcgcctacaccaactggcgctaccaggcggctgag
aagacccgcgttggcgtgcgtctgctcggtcatttcctgcgcggctcgtccatgcgcggg
gctcccaaggagcagatggagatcattgagattccactgtttgagcgtcctctgtgtgtg
gcgtgctgtggggtgaccggagacctgctggtggggtgtcctaagagcctggtgctgttc
agtctaaagagacaggccctcaacgacaagctctccatcctggactttgagcgctgtctc
atcatccacctcccgggactgtcgccccaacaggtagggatggatgtggcgatctgtgca
gggtacattgccctgcagacagagctggaggtgctggtggtcaaactggagagacttcct
ggtgctgcttttacccagaagtcagctgacaagaagccccaggaccacagtctggtcccc
caagatatgatccctggagcagaacacgacaacgagacggaggggaggagagagggtctg
gctggtcaccgtgaccatgatgacttcttcattttccccaagcaccaagagctcctgggg
gacagggctaaggactgtggggtcaagatctctctggagtggacaggcatggagagtgag
gccaggggcaacttcatcatcacctatatcttatacaggcgttttgctccagacttcttc
caggactgtagtgttgaggagacccacctgcactccctgcagtttcacccagtgttcacc
agcaaccaggaagtatgtgtggagggggttagaggggtggagccgacgtgtttgttctgt
ttcttctcgctgcccaagacgggctatttgtacagcgtgaggggcggggttcagatggtc
tcagcctatcagtatccagagaaggcccagcaggccgtcctcactgacctcttcctccac
atcatcacaaagaatgctctccagtgcttctcagtgaggtgtgcagcagtggcagccaga
gctgaggacccttacatcgataccaccatgaaggcctgtcctcccatcaccatggagttg
tgtgctctgcgtattcagctgttcattggtctgaaggctctgtgtcactaccgacaccac
atcgtcctgctgaccactgcagatgtggagaccagggaggacacagagaggaccgcacgc
agagtcatagaatacaaagatcaccaaacccttagggggattttcctagcagtaggtata
gagccttccaccacgccggctctgaagcgttttctggcccactccttcctgaacaggaag
tcacccttcaccaagccccagaatcccagtgagatgggtcacggctggaacctgtacgtg
gtcaacaccgtccccccgctccagctctacaacgagatggtggagtacagtaagacgtat
gaggagaccaaccccctgtctcacagccgtctgcacctgctcagtgaagcccacctcctc
ctgagagccacgctcctggacccccgggttggaaaccctgtagaacggcctcagaccact
ggtcagaacctagcccaggccctgggatataatacaacccgcaccgcagacagacaggag
ctgcagcaggccttccaggagagctgcgcccagttaggagactgcttcagcaggtttgac
aagcgggactgccacctggccctgccctactataagatgtcaggcctgtctctgacagag
gtgatctccaggaacaggggtctgtctaacagcctctgtggctacgggaagggcttcctc
ttcttcctcaaacattccctctatgaggagaccctggagctgctcactgaggagacggcc
aacgaggtgctggatatcttcggtgtggccgagccgtcccagcttccccatgttatagcc
agcccttccatggccagagccagccctgactgtggcctggcccacctagagcggctggag
tccatcggagccccctccgtacccctcaccctgtccaaggctgccctggccctgcgcatg
gcagacctgcagctctacaggcaacacatggaccgacacacagagatgctgcaggtgtat
gggttcatcgaggaagccaagctgctgctgcacggcagaggggatacggtggtacctact
ctcctggctcgtcacctcagggacaaccaggacggcctgctggtggcagccatggtggcg
ctgcacgagaacgacaaggtcaaactggacgaggctgacctcttcttccaggagctgtgt
ggggatgtgtcagggccccagggaggccctcagctgctggttgacttctgggaagccttg
ctgatggcctcgtcacaggaagctgtcatccaggagctgctgttccgcctcaccactgtc
tacatcgatcgcgtcacacgccgagacggccgcggattcaaaccgctcaagagcgcagac
gacctgattaactggtgttcccactatggcgcgttgtatccctgggtcagcatcctgact
ccagctcacttcaacatcattccagaggacctccacaaactacagtccctgctgtgcggt
cccaccctggacgcgtcatccatcctgcccctgttggagcagctgcctgacgaggacaac
gccgggctcagtgtgcacgtgctctgtgccaccaagctgggtcactacgagagctccatc
gagaggttgctagaccgctgtcctcaggccatcatcccttatgctaatcatgagctgcag
aacaacaacatggctctgtggtggcagaagctgttccccgagctgtgtgagagaaccaga
gcaacacagggagagaacaccatcctgctggctgcactcaaagaaacgttggtggtggtt
gccatggagctgaaccccctggagttcctggacctgttgcctgacgacgggacggtccac
ttcttcctgcctcacctgctggagtgcagccagagaaacctcatgatgtga
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