Oncorhynchus kisutch (coho salmon): 109882728
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Entry
109882728 CDS
T09179
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109882728
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Cadherin related
109882728
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
109882728
NCBI-ProteinID:
XP_031655890
Ensembl:
ENSOKIG00005041956
LinkDB
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Position
LG20:7998660..8025874
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AA seq
894 aa
AA seq
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MKNQKKKRGFIFLLVFLVTLPPSLGRQTSDYAPYFYDKGPSSTNGNMALFSISEDTPVGT
QVYILNGTDPEGDAVWFGLTFEKGTREYLRVDPKSGNITLIQELDREKQGEISALVSITD
GRNKVAETIRVFVTDANDEEPEFQNLPFAVDVPEDTPAGSSIYRVQAVDKDMGSGGSVTY
YLQGAPTTKFTIDGHSGVLRIKPGETLDFETTTLHFVTVVAKDGGGQYKGKHQVLTSTAT
ITINVLDAQDTPPAFVGTPYFGYVYEVSLPGSEIATVFAKDGDEGNPNPIHYSITNGSED
VFTINSTTGCISLTTYPVTLRNELYEIKVKATELGPSEELLDYNAMTMVTVRVVDLNNHP
PTFYGENGPQSQFEVTMYEHPPEGEILRGLKITVNDSDQGANAKFKLRLVGPGRVLRVVP
QTVLNEAQVTVIVEDSAAIDYEKGKSLTYKLLAVEIDTPERFSATADIVIHLLDTNDNTP
RFTSEYYMARIPENSPGGSNVVSVTANDPDSGLWGEVKYSIYGSGSDLFLIHPSSGIIYT
QAWATLDAEVKSKYNFYVKAEDTEGKYSLAEVFVTVLDMNDHVPEFDDSFVERTMIIGAP
VRVEAIDADAESPNNVIEYSIMQAEPDNIFDINAETGEIKLKSYIKSMEIVQNITKQKDC
RWSLVVQARDRGSPSFSTTAVVNIDITEATQLKGPMAAFLLQSRHNPMKALGMVAGVISI
LVGVTVLISTAMFLRNTKSNRIMPARRIIIRRRPSRDRKPWTFNVPFRGGGGNDPLNKFV
VGDPEAGSVSINPNKNIRPRCSRSKPNPLPPRAPCLSPPSCPPLSSDPRPSERPRAAVPT
VSGALASKGSRRSSQSRESNISSETTRIPVSSALVSELKRRLEQKIIESNSSYY
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccaaaagaaaaagagagggtttatttttctcttagtcttcttggttactctt
cctccctcgttgggaaggcaaacgtcagactatgctccctatttctacgacaaaggaccg
agcagcaccaatgggaatatggctctcttcagtatctcagaagacacaccagtcggaaca
caggtatatatcctaaatggcactgacccagagggggatgccgtgtggtttggcctgacc
tttgagaagggcaccagagaatacctgagagtggaccccaaatcaggaaacataactctc
attcaggaactagacagagagaaacaaggtgaaatctcagctctcgttagcataacagat
ggccggaataaggttgccgagacgatacgggtgtttgtcaccgatgccaatgatgaagaa
ccagagttccagaacctgcctttcgccgtagacgtcccagaggacactccagctggaagc
agcatttacagagtacaagcggtggataaagacatgggctctggaggcagtgtcacctac
tacttacagggagctcctactaccaagttcaccatcgacggccacagtggggtcctgcgg
atcaaaccaggcgagacgctcgactttgagacgacaacgttacactttgtgacggtggtt
gccaaggatgggggcgggcagtacaaagggaagcatcaggtgttgacatctacagccacc
ataaccatcaacgtcctcgacgcccaagacactcctccagccttcgttggaactccttac
tttggctacgtctacgaggtctcacttcctggttctgaaatagccactgtgtttgccaaa
gatggtgacgaaggaaaccctaatcctattcattactctattaccaatggtagtgaggat
gtcttcaccatcaatagcacaactggttgtatcagcctaacaacttatccagtcacgctg
aggaatgaattatatgaaatcaaagtcaaggccactgagctggggcctagcgaggagctg
ttggactacaatgccatgactatggtgacggttcgagtggtggatctcaacaaccaccct
cctaccttctacggagagaacgggccccagagccaatttgaggtgaccatgtatgagcac
cctccagagggggagatcctcagggggctgaagataacggtcaacgactctgatcagggg
gcgaatgctaaatttaaactaagattggtagggcctggtcgtgtactcagagtggttccc
cagacggtcctaaatgaagcacaggtcaccgtcatcgttgaagactctgctgccattgac
tatgaaaaaggcaaatccttaacatacaagttactggctgtggagattgacacccctgag
aggttcagtgcgacggctgatattgtgattcaccttttggacaccaatgacaacactccc
agattcacctcagagtattacatggcacgtatcccggagaactcccccggaggctccaac
gttgtgtctgtcaccgccaatgatccagactctggcctttggggtgaagtcaagtactcc
atctatggatccggatctgatttgtttctcatccacccgtcctcaggcatcatctacacc
caggcctgggccactctggatgctgaggtcaagtccaagtacaacttctacgtgaaggca
gaggacacagagggcaagtacagcctggcagaggtgtttgtcactgtccttgacatgaac
gaccacgttccagagtttgatgacagctttgtggagaggaccatgatcatcggtgcacct
gttagggtagaggccatagatgccgatgcagagtcgcccaataacgtcattgagtattcc
attatgcaagctgagccggacaacatcttcgacatcaacgcagagactggagagatcaag
ctcaagtcgtacatcaagtccatggagatcgtgcagaacatcaccaagcagaaggactgc
aggtggtctctggtggtccaagcccgggaccgagggtctccatccttcagcactaccgcc
gtggtcaacatcgacatcactgaggcgactcaactcaaggggcctatggcagccttttta
ttgcaaagtaggcacaacccaatgaaggccctaggcatggtcgctggtgtcattagcata
ttggtaggcgtcactgtcttgatctccacggctatgttcttgcgcaacacaaagtccaac
aggataatgccggcgcgtcgcatcatcatcagacggagaccgtcaagagaccgtaagccg
tggacgtttaacgtacccttccgtggcggcggtggaaatgacccgttgaacaagtttgtt
gtaggcgacccggaagcagggagtgtcagcatcaaccccaacaaaaacatcagaccccgg
tgctctagatcaaagcccaatcctctgccccccagagccccctgtctgtctcctccatcc
tgtccccctctgtcctccgaccccaggcccagtgagaggccccgggctgcagtgccgacc
gtctctggggccctggcttcaaagggctccagaagatccagccagagcagagagagcaac
atcagctctgagactactagaatccccgtcagctcagccctggtctctgaactcaaaagg
agactggagcagaaaatcattgagagcaactcaagctattattga
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