KEGG   Oncorhynchus kisutch (coho salmon): 109882730
Entry
109882730         CDS       T09179                                 
Name
(RefSeq) protein Tob1-like isoform X1
  KO
K14443  protein Tob/BTG
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109882730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109882730
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109882730
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     109882730
SSDB
Motif
Pfam: BTG PAM2
Other DBs
NCBI-GeneID: 109882730
NCBI-ProteinID: XP_020330409
LinkDB
Position
LG20:8094597..8098805
AA seq 381 aa
MQLEIQVALNFLISYLYNKLPRRRVNIFGEELERQLKKKYDGHWYTDKPYKGSGYRCLHV
GEKVDPVVEQAAKESGLDLDDVRDNLPQDLSVWIDPFEVSYQLGEKGPVKVLYVDDNNEN
NGSELDKEIKNSFNPEAQVFMPISDSIGTSSESSSPSPPFGQSAAISPSFMPRSTYPITF
TTATFAATKFGSTKMKISGRNNNNNGNGNKVARTSPTNDLGLNVNTLMKQKAVSTSMYSL
YGLGQQQNASALSPNAKEFVFPSLQGQGSSGGVFPSLQGQGSSGGVFPSLQGQGSSGGVF
PSLQGQGSSGGVFPSLQGQGSSGGVFPSEGSLSLSPLQYNDSFDVFAAYGDLNDKSLNDG
LNFNLSNMQYSKQQFQSVMAN
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcagcttgaaatccaagtagcacttaactttcttatctcctacttgtacaacaaactc
cccagacggcgtgtgaacatcttcggggaggagctcgagaggcagctgaagaagaagtac
gatggccactggtacacggataagccatacaagggctctggttacaggtgcctccacgta
ggggagaaggtggaccctgtggtggagcaggcagccaaggagagcggcctggacttggac
gacgtccgggataatctccctcaggacctaagtgtgtggattgaccccttcgaggtttcc
taccagcttggcgagaaggggccggtcaaggtgctgtatgtggatgataacaatgagaac
aacgggtccgagttggacaaggagatcaagaacagcttcaacccagaggcccaggtcttc
atgcccatcagtgactctatcgggacttcctctgagtccagctctccttcaccccctttc
gggcaatctgcggccattagcccctcgttcatgccgcgctccacctatccaataaccttc
accaccgccacctttgccgccaccaagtttggttctaccaagatgaagatctccggccgc
aacaacaacaacaatggtaacggcaacaaggtggcccgcacctccccaaccaatgacctg
gggctgaatgtgaacaccctaatgaagcagaaagccgtttccacctctatgtactctctg
tacggcctgggccagcagcagaatgcctctgcactctctcctaatgctaaggagtttgtg
ttccccagcctccagggtcaggggagctccggtggcgtgttccccagcctccagggtcag
gggagctccggtggcgtgttccccagcctccagggtcaggggagctccggtggcgtgttc
cccagcctccagggtcaggggagctccggtggcgttttccccagcctccagggtcagggg
agctccggtggcgtgttccccagcgagggctctctcagcctcagcccgctgcagtacaac
gattcctttgacgtgtttgcggcctacggagatctcaacgacaagtccctcaatgatggg
ctgaacttcaacctcagcaacatgcaatattccaagcagcaattccagtcggtcatggct
aactaa

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