Oncorhynchus kisutch (coho salmon): 109882730
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Entry
109882730 CDS
T09179
Name
(RefSeq) protein Tob1-like isoform X1
KO
K14443
protein Tob/BTG
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109882730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109882730
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109882730
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109882730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
109882730
NCBI-ProteinID:
XP_020330409
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All DBs
Position
LG20:8094597..8098805
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AA seq
381 aa
AA seq
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MQLEIQVALNFLISYLYNKLPRRRVNIFGEELERQLKKKYDGHWYTDKPYKGSGYRCLHV
GEKVDPVVEQAAKESGLDLDDVRDNLPQDLSVWIDPFEVSYQLGEKGPVKVLYVDDNNEN
NGSELDKEIKNSFNPEAQVFMPISDSIGTSSESSSPSPPFGQSAAISPSFMPRSTYPITF
TTATFAATKFGSTKMKISGRNNNNNGNGNKVARTSPTNDLGLNVNTLMKQKAVSTSMYSL
YGLGQQQNASALSPNAKEFVFPSLQGQGSSGGVFPSLQGQGSSGGVFPSLQGQGSSGGVF
PSLQGQGSSGGVFPSLQGQGSSGGVFPSEGSLSLSPLQYNDSFDVFAAYGDLNDKSLNDG
LNFNLSNMQYSKQQFQSVMAN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaatccaagtagcacttaactttcttatctcctacttgtacaacaaactc
cccagacggcgtgtgaacatcttcggggaggagctcgagaggcagctgaagaagaagtac
gatggccactggtacacggataagccatacaagggctctggttacaggtgcctccacgta
ggggagaaggtggaccctgtggtggagcaggcagccaaggagagcggcctggacttggac
gacgtccgggataatctccctcaggacctaagtgtgtggattgaccccttcgaggtttcc
taccagcttggcgagaaggggccggtcaaggtgctgtatgtggatgataacaatgagaac
aacgggtccgagttggacaaggagatcaagaacagcttcaacccagaggcccaggtcttc
atgcccatcagtgactctatcgggacttcctctgagtccagctctccttcaccccctttc
gggcaatctgcggccattagcccctcgttcatgccgcgctccacctatccaataaccttc
accaccgccacctttgccgccaccaagtttggttctaccaagatgaagatctccggccgc
aacaacaacaacaatggtaacggcaacaaggtggcccgcacctccccaaccaatgacctg
gggctgaatgtgaacaccctaatgaagcagaaagccgtttccacctctatgtactctctg
tacggcctgggccagcagcagaatgcctctgcactctctcctaatgctaaggagtttgtg
ttccccagcctccagggtcaggggagctccggtggcgtgttccccagcctccagggtcag
gggagctccggtggcgtgttccccagcctccagggtcaggggagctccggtggcgtgttc
cccagcctccagggtcaggggagctccggtggcgttttccccagcctccagggtcagggg
agctccggtggcgtgttccccagcgagggctctctcagcctcagcccgctgcagtacaac
gattcctttgacgtgtttgcggcctacggagatctcaacgacaagtccctcaatgatggg
ctgaacttcaacctcagcaacatgcaatattccaagcagcaattccagtcggtcatggct
aactaa
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