Oncorhynchus kisutch (coho salmon): 109882736
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Entry
109882736 CDS
T09179
Name
(RefSeq) coatomer subunit beta'-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109882736
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109882736
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
109882736
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
109882736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_LRRK2
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
109882736
NCBI-ProteinID:
XP_031646962
LinkDB
All DBs
Position
LG15:75312223..75384778
Genome browser
AA seq
1619 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVASLYNGSVCVWNHETQTLVKTFEVCDLPV
RVAKFVARKHWVIAGADDMQIRVFNYNTLERAHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDKKWVCGQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHTQNVSCVSFHPE
LPIILTGSEDGTVRVWHSSTYRLENTLNYGMERVWCVCGQRGANSVALGYDEGSIIIKLG
REEPAMSMDSNGKIMWAKHSEVQQANLKAMGEAEIQDGERLSLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWGHDSSEYATRESTSMVKVFKNFKE
KKSFKPDFGAEGIHGGFLLGVRSVSGLAFYDWENTELVRRIEIQPKHVFWSESGELVCIA
TEESFFVLRYLAEKVATAQETKEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTVAHLDRTMYLLGYIPKDDRLYLGDKELNIVTYSLLVSVLEYQTAVMR
RDFGMADRVLPTIPKEMRTRVAHFLEKQGFMQQALAVSTDSEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELATTKCQFVLAQECLHHAQDYGGLLLLATASGNTTMVGKLAEGAE
RDGKTNVAFLTYFLQGKLDKCLELLIKTNRLPEAAFLARTYLPSHVSRVVKLWKESLGKV
NQKAADALANPTDYSNLFPGLQEAFLAEDYLKETHVRLRPAAEYPLITSNENRNVLEESA
DYVPKVVPAEPEVAGSMDETPVLKAVVETPVMAAVVEAAAPEAPVVEESIVMEEVEPVAA
AVVEFIPAVEESIPVTVVEPTMAAVEESIELAEEEPIIVEVEAPEPKQATSVEDIITKIE
ALVTIENDTEVPLLVPEVAQSTPEEDFRATPEEAVEEGPATMKLIATDAPVTESFTEPIV
TEAPVAEEAPVPIATEPEPVTIEAVVEAEAPIAAAVLEAIATEPMVTEQAPVTIEVAVAA
EAPITEAVAEAIAASEKAPVIVEENEPAPAPFIDLVPARDLASAIDLVPARDLASAIDLG
PARDLASAIDLSPAPLIDLAPARDLASAIDLAPAIDLVPARDLASAIDLVPARDLASAID
LGPARDLASAIDLSPAPLIDLAPARDLASAIDLAPAIDLAPAPFIDLAPAIDRASAIDLA
SAIDLARDLAPAPLIDLAPARDLAPARDLASAPFIDLAPARDLAPARDLASAIDLAPAPL
IDLAPARYLASAIDLAPAPLIELAPLIDLAPAIDPATTPTVEDKAAAAPAVEPLPALTQV
VPPGAEPAPAAPLAALLEGKGVEEAAPAAPLAALLEGKGVEEAAPAAPLAALLEGKGVEE
AAPLAALLEGKGVEEAAPAASLAALLEGKGVEEAAPLAALLEGKGVEEAAPLAALLEGKG
VEEAAPAAPLAALLEGKGVEEAALEAPLAALLEGKGVEEAAPLAALLEGKGVEEAALEAP
LAALLEGKGMEEAAPVAVATASMDLLDLNDEGLDDLDMFDLDDDIDTTDVNLDDDFLDD
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccggttggacatcaagcggaagctgaccgctcggtcggaccgtgtgaagagt
gtggacctgcacccaactgaaccatggatggttgccagcctgtacaatggcagtgtctgt
gtctggaaccacgagacacagaccctggtgaagacattcgaggtgtgtgacctgcctgtg
agagtggctaagtttgtggcgaggaagcactgggtcattgctggagcagatgacatgcag
atccgtgtgtttaactacaacactctggagagagctcacatgtttgaggcccactctgac
tacatccgctgcatcgcagtccacccaacacaaccttacatccttaccagcagtgatgac
atgctgatcaagctttgggactgggacaagaagtgggtgtgtggtcaggtgtttgagggc
cacacccactatgtcatgcagatcgtcatcaaccctaaagacaacaaccagttcgccagc
gcctccctggacaggaccattaaagtgtggcagctgggatcttcctcccctaacttcact
ctggagggccatgagaaaggagtcaactgtatcgactactacagcggaggggacaagccc
tatcttatatcaggagctgacgaccgcctggtcaagatctgggactaccagaataagaca
tgtgtgcagactctagagggccatacccagaatgtgtcctgtgtcagctttcaccctgag
ctgccaatcattctcacaggctccgaggacggcaccgtgagagtctggcattccagcacg
taccgcctggagaacacactgaactatgggatggaacgtgtgtggtgtgtgtgtggccaa
cgaggcgccaacagtgtggcgctgggatatgatgaaggcagcatcatcatcaagttgggt
cgcgaggaaccagcaatgtctatggactctaacggtaagatcatgtgggccaagcactct
gaggtgcagcaggccaacctgaaggccatgggagaggctgagatacaggacggagagagg
ctgtccctggccgtcaaagacatgggcagctgtgaaatctatccccagaccatccagcac
aaccccaacggcaggtttgtggtagtgtgtggggatggagagtacatcatctacactgca
atggccctgaggaacaagagcttcggttcagcacaggagtttgtttggggccacgactcc
tcagagtatgctactcgggagagcaccagcatggtcaaagtcttcaagaacttcaaggaa
aagaagtcttttaaaccagactttggggcagaaggtatccatggtgggttcttgctgggc
gtgaggtcagtgagtggtctggccttctacgattgggagaacacagagctggtccgccgc
attgagatccagcctaaacacgtcttctggtcagagtctggggagctggtgtgtattgcc
acggaggagtctttctttgtgttgcgctacctggctgagaaagtggcaacagcacaggag
accaaggagggagtcaccgaggatgggatagaggatgccttcgaggtgttgggtgagatt
caggaggtggtgaagactggtctgtgggtgggagactgtttcatctacaccagctcagtc
aacagactcaattactacgtaggaggagagattgtcaccgtcgcccacctggacagaact
atgtacctgttgggctacatccctaaggatgaccgtctgtatctgggtgataaggagctg
aacatcgtcacttactctctgctggtgtcggtactggagtaccagacagctgtaatgagg
agggactttgggatggccgacagggtcctacccaccatccctaaagagatgaggaccagg
gtcgcccactttttagagaaacagggtttcatgcagcaggctctggctgtgtccacagac
tcagaacacaggtttgagttggctctgcagctaggagaactgaagatcgcctaccagctg
gctgtagaggctgagtcggagcagaagtggaagcagttggcagagctggccaccactaag
tgccagtttgtcctggcccaggagtgtctgcaccatgcccaggactatggggggctactg
ctgttggccacagcctcgggcaacaccaccatggtgggcaagctggcagagggggcagag
agagatggcaagaccaatgtggctttcctcacctatttcctccaggggaaactggacaaa
tgtctggagctcctcattaaaaccaaccggctgccagaggctgcattcctggccagaaca
tacctgcccagccatgtgtctagagtggtgaagctgtggaaggagagcctggggaaggtg
aaccagaaggcagctgatgcgttggccaaccctacagactacagcaacctgttccccggc
ctacaggaggccttcctggccgaagactacctcaaggagacccacgtcaggctgaggcct
gccgcagagtaccctctcatcacctccaatgagaataggaatgtcctggaggaatctgca
gactatgtgccaaaagtagtgcctgctgaaccagaggttgctgggagcatggatgaaacc
cctgtattgaaagcagtggtagaaacccctgtaatggcagcagtggtggaggctgcagcc
ccagaagctccagtagtggaagagtccattgtcatggaagaggtagaacctgttgcagct
gcagtagtggagtttatcccagcagtggaagaatctatcccagtgacagtagtggaacca
actatggctgcagtggaagaatccattgagttggcagaggaggaacccattattgttgaa
gtggaagctcccgagccaaagcaggcaacatcagtggaagatatcatcactaagatagag
gctcttgtcaccatagaaaatgacacagaagtacccctcttggtgccagaggtagcacag
tccaccccagaggaagatttcagagcaacaccagaggaggccgttgaggaaggacctgca
acaatgaagctcatagcaacagatgcacctgttacagagtctttcacagaacccattgta
acagaagcaccagttgccgaggaagcgccagtgcctatagcaacagaaccagaacctgtt
accatagaagcagtggtggaagctgaagcacccattgccgcagcagtactagaagccata
gcaacagaacccatggttacagaacaagcacctgttaccattgaagtggcagtggcagca
gaagcacccattactgaggcagtagcagaagccatagcagcatctgaaaaagccccagtc
attgtagaagagaatgaacctgccccagcaccattcatagacctagtcccagccagagac
ctagcctcagccatagacctagtcccagccagagacctagcctcagccatagacctaggc
ccagccagagacctagcctcagccatagacctatccccagcaccactcatagacctagcc
ccagccagagacctagcctcagccatagacctagccccagccatagacctagtcccagcc
agagacctagcctcagccatagacctagtcccagccagagacctagcctcagccatagac
ctaggcccagccagagacctagcctcagccatagacctatccccagcaccactcatagac
ctagccccagccagagacctagcctcagccatagacctagccccagccatagacctagcc
ccagcaccattcatagacctagccccagccatagaccgagcctcagccatagacctagcc
tcagccatagacctagccagagacctagccccagcaccactcatagacctagccccagcc
agagacctagctccagccagagacctagcctcagcaccattcatagatctagccccagcc
agagacctagccccagccagagacctagcctcagccatagacctagccccagcaccactc
atagacctagccccagccagatacctagcctcagccatagacctagccccagctccactc
atagaactagcaccactcatagacctagccccagccatagatccagctacaaccccaact
gtagaggacaaggctgcagcagccccagcagtagagcccctaccagcactcacccaggtg
gttccaccaggcgcagagccagcccctgcagcccctctagctgccctcttagagggtaaa
ggtgtggaggaggcagcccctgcagcccctctagctgccctcttagagggtaaaggtgtg
gaggaggcagccccggcagcccctctagctgccctcttagagggtaaaggtgtggaggag
gcagcccctctagctgccctcttagagggtaaaggtgtggaggaggcagccccggcagcc
tctctagctgccctcttagagggtaaaggtgtggaggaggcagcccctctagctgccctc
ttagagggtaaaggtgtggaggaggcagcccctctagctgccctcttagagggtaaaggt
gtggaggaggcagcccctgcagcacctctagctgccctcttagagggtaaaggtgtggag
gaggcagcccttgaagcccctctagctgccctcttagagggtaaaggtgtggaggaggca
gcccctctagctgccctcttagagggtaaaggtgtggaggaggcagcccttgaagcccct
ctagctgccctcttagagggtaaaggtatggaggaggcagcccctgtagcagtagcaaca
gcatccatggacctgctggacctgaatgatgagggccttgacgacctggacatgtttgat
ctggacgatgacatcgacaccacagacgtcaatctggacgatgacttcttagacgactga
DBGET
integrated database retrieval system
