Oncorhynchus kisutch (coho salmon): 109882852
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Entry
109882852 CDS
T09179
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109882852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109882852
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109882852
mRNA degradation factors
5'-3' decay
Lsm complex
109882852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
109882852
NCBI-ProteinID:
XP_020330533
Ensembl:
ENSOKIG00005020519
LinkDB
All DBs
Position
LG3:complement(40453367..40456280)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIDDIDKKHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDMDKPCDTVLQQVSIEEILEEQRLQQQAKQETEKAKVTALKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccagggaccgcgagtctcattgatgacatagacaaaaagcatcttgta
cttcttcgcgatggaagaacgctaattgggtttcttagaagcatcgaccagtttgccaac
ctagttttccatcaaacagttgagcgcatccatgtgggcaagaagtttggggacatcccc
agaggaatcttcattgtgagaggagagaacgttgttttgcttggtgaaatagacatggat
aagccgtgtgacacagtcttgcagcaggtttctatagaggagatcctagaggagcagcga
ttgcaacagcaagccaagcaggagacagagaaagccaaggtgaccgcactgaaggacaga
ggcctatccatccccaaggcagataatcttgatgaatactga
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integrated database retrieval system
