KEGG   Oncorhynchus kisutch (coho salmon): 109882933
Entry
109882933         CDS       T09179                                 
Name
(RefSeq) transportin-2-like
  KO
K18727  transportin-2
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109882933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109882933
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     109882933
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_GCN1 TPR_IMB1 HEAT_2 Arm TOR1L1_N IBN_N HEAT_EF3_N Vac14_Fab1_bd TPR_IPO5 TPR_DNAAF5 HEAT_MROH2B_C Cnd1 Adaptin_N PDS5 MMS19_C Ltn1_1st HEAT_GCN1_C UNC45-central INTS7_N HEAT_MROH2B_1st Dopey_N TPR_TTI1_C TPR_IPO11 Caerin_1
Other DBs
NCBI-GeneID: 109882933
NCBI-ProteinID: XP_031667069
Ensembl: ENSOKIG00005049074
LinkDB
Position
Unknown
AA seq 889 aa
MEWQPDEQGLQQVLQLLKDSQSPDTATQRAVQEKLEQLNQFPDFNNYLIFVLTSLKSEDE
PTRSLSGLILKNNVKAHYQNFPPLVADFIKRECLNNIGDPSPLIRATIGILITTIASKGE
LQTWPELLPQLCNLLNSEDYNTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFISSRAQALMDHIDTFIESLFALAGDEDCEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDPDENVSLEACEFWLTLAEQPVCKEALSGHLVQLIP
ILVNGMKYSEIDIILLKGDVEEEDDTVPDSEQDIKPRFHKSRTVTLQHEGGEGEEGEDHD
DDDDDDDTLSDWNLRKCSAAALDVLANVFRDELLPHLLPLLKGLLFHPDWVVKESGILVL
GAIAEGCMQGMVPYLPELMPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDSHLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIEKLMPPLIAKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMMYSQQPDQYEAPDKDFMIVALDLLSGLAEGLGGHVDQ
LVSRSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFPHVKPCIAEFMPILGTNLNPEF
ISVCNNATWAIGEICMQMGVEMQPYVSLVLNQLVEIINRPNTPKTLLENTAITIGRLGYV
CPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVAS
WVSPKDDLRDMFYKILHGFKDQVGEENWQQFSEQFPPQLKERLSACYGV
NT seq 2670 nt   +upstreamnt  +downstreamnt
atggagtggcagccggatgaacagggtttgcagcaggtgcttcagctgctgaaggactcc
cagtctccggacacagccacacagagagctgtgcaggaaaaactggaacagctcaaccag
ttcccagacttcaataactatctcatcttcgtccttacaagcctcaaatcagaagatgag
ccgacccgttctctaagtggtctcatattgaagaacaatgtgaaagcccattaccagaac
tttcctcctctggtcgctgacttcatcaagagggaatgtctcaacaacatcggagatccc
tcgcccctcatcagagcaaccataggcatcttgataacaaccatagcatctaaaggagag
ctgcagacatggcctgaactcctccctcaactctgtaacctgctcaactctgaagactac
aatacctgcgagggttctttcggagcactgcagaagatctgtgaggattcttcagagctg
ttggacagcgatgctctcaacagacccctgaacatcatgatccctaagttcctacagttc
tttaaacactgcagcccaaagatcaggtctcatgccatagcgtgtgtgaatcagttcatc
agcagtagagcccaggctctgatggatcacatcgacaccttcatcgagagtctgtttgct
ctagcgggggatgaggactgtgaggtgaggaagaacgtgtgtagagctctggtcatgctg
ctggaggtccggatagaccgactcataccacacatgcacagcatcatacagtacatgctc
cagcgtacccaggacccagatgagaatgtcagtctggaggcctgtgagttctggctcacc
ctggctgagcagcccgtctgcaaggaggccctgtctgggcacctggtccaactcatccct
atcctggtgaatgggatgaagtactctgagatagacatcatcctcctaaagggagatgta
gaggaggaggacgacaccgtaccagacagtgagcaggacatcaagcctcgcttccacaag
tcacgcactgtcaccctgcaacacgagggaggagagggggaggagggggaggaccacgac
gatgacgatgacgacgatgacacgctctccgactggaacctgcggaagtgttcagcggca
gcgttagacgtgttggctaacgtgtttcgtgatgagctcctcccccacctgctgcccctg
ctgaagggcctgttgttccacccagactgggtcgtcaaggagtctggaatactggtgctg
ggggctatcgctgagggttgtatgcagggcatggttccctacctaccagagttgatgcct
cacctcatccagtgtctctgtgataagaaggccctggtgcgctccatcgcctgctggacc
ctgtcccgctacgcccactgggtggtcagccagccccccgactcccacctcaaacccctc
atgactgaactcctcaagaggatcctggacgggaacaagagggttcaggaggccgcctgc
agtgcgtttgccaccctagaggaggaggcctgtacagagctggttccctatctgagcttc
attctggatactctggtcttcgcctttggaaaataccaacacaagaacctgctcatactg
tacgacgccataggaacactggcggactccgtaggacaccacctcaaccaaccggagtac
atagagaagctgatgcctcctctcatcgccaagtggaatgagttgaaggatgaagacaag
gacctgtttcctctgttagagtgtctgtcctctgtagctacagccctccagagtggcttc
ctgccctactgtgaaccagtctaccagcgctgtgttacactggtgcagaaaacactggct
caggctatgatgtacagccagcagccggaccagtacgaagctcctgataaggactttatg
atcgtggccctggacctcctcagtggtctggctgagggcctggggggccacgttgatcag
ctagtgtcccggagcaacatcatgacactactgtttcagtgcatgcaggacaccatgcca
gaggtgagacagagctccttcgccctgctgggtgatctgaccaaggcctgcttccctcac
gtcaaaccctgcatcgctgagttcatgcctattctagggaccaacctgaacccagagttc
atctctgtgtgtaacaacgctacctgggccattggagagatctgcatgcagatgggtgta
gagatgcagccctatgtgtctctggttctgaaccagctggtagagatcatcaacagaccc
aacacacccaagaccctgctggagaacactgccattacgattggtcgcctgggctacgtg
tgtcctcaggaggtggctccgatgctccagcagttcatcagaccgtggtgtacgtcccta
cggaacatccgtgacaacgaggagaaagactccgccttcagagggatctgcatgatgatt
ggtgtaaaccctgggggagtggtccaggacttcatcttcttctgcgatgccgtggcgtcc
tgggtcagccctaaagacgacctgagagacatgttctacaagatcctccatggttttaag
gaccaggtaggagaggagaactggcagcagttctcagaacagtttcccccccagctgaag
gagagactgtctgcctgctacggcgtgtag

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