Oncorhynchus kisutch (coho salmon): 109882970
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Entry
109882970 CDS
T09179
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109882970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
Notch
NOD
NODP
Ank_3
EGF_2
Ank_4
Ank_5
EGF_3
EGF_DL_JAG
cEGF
Motif
Other DBs
NCBI-GeneID:
109882970
NCBI-ProteinID:
XP_020330632
Ensembl:
ENSOKIG00005014728
LinkDB
All DBs
Position
LG23:complement(677186..747811)
Genome browser
AA seq
2488 aa
AA seq
DB search
MYRFFVKLTFLIPVIVITQGLRCSLTTESCLNGGRCEASSDRNGECRCTSDYVGSRCQYS
NPCNPSPCRNGGECRAVSHGNTFEFHCKCRLGFSDQLCLTPTNHACMSSPCRNGGTCDLI
TLSDYRCRCPPGWSGKTCQIANPCASNPCANGGQCSPFESHYICACLPAFHGQTCKLDVN
ECAQMSSPCRNGGMCVNEVGSYHCRCPQEYTGANCETPYMPCNPSPCHSGGTCVQKGDTS
YDCSCLPGFTSQNCDHNIDDCPGHNCQNGGLCVDGVNTYNCQCPPHFTGQFCTENVDECE
MMPNTCQNGGTCHDTYGSFHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNQDIDECSLGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCQNDATCLDQIGGFHCICMP
GYEGVFCQINTDECASMPCLNNGKCIDRINSFHCECHKGFSGGLCQVDIDECASTPCMNG
AKCTDGPNKYSCECTEGYSGQHCETDINECYSDPCHYGTCKDGLATFTCYCHPGYTGRLC
ETNINECLSQPCQNGGTCQDRENTYICTCPKGTAGFNCEVNLDDCKSKPCDYGRCIDKIN
SYECACEPGYAGAMCNINTDECAINPCHNGGTCIDGINSFTCLCPEGYSDATCLLQVDEC
GSNPCIHGRCQDLLNGYRCFCDSGWGGPNCDINNNECESNPCMNGGTCKDMTSGYVCSCR
AGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGEMCETLLAPCSPMQPCK
NSGVCHESEDYQSFSCLCPEGWQGQTCEIDINECVKSPCRSGATCHNMVGSYRCSCRPGY
TGQKCETDIDDCKPNPCSNGGLCRDGVDSFVCTCLPGFRGGRCEHDINECESNPCKNGAN
CTDCVNSYTCTCPPGFSGINCENNTPDCTESSCFNGGTCVDGINTFTCLCLPGFTGSYCQ
HDINECDSKPCLNGGTCLDSYGTYKCTCSHGYTGVNCQNLVRWCDSSPCKNGGSCWQQGS
SYTCQCQTGWTGLYCDVPSVSCEVAAKQQGVEVAHLCRNSGQCLDAGNTHYCRCQAGYMG
SYCQEQVDECSPNPCQNGATCTDYLGGYSCECLPGYHGVNCSKEINECLSQPCQHGGTCI
DLINTYKCSCPRGTQGIHCEINLDDCNPSTDPLTNEPKCFNKGQCVDRVGGYHCMCPAGY
VGERCEGDVNECLSDPCDLRGSYNCVQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNG
GMCAVASNNPDGFICKCPPGYTGSSCEYDSRFCGNLNCRNGGTCVSGHLSPRCLCPTAFT
GPECQTPTNSPCNVNHCYNGGTCQRTPDAPFFHCSCPNNFNGLLCHILDYSFPGGFGRDI
TPPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRY
FNDGKCDEQCKSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGL
DCANNMPEKLADGHLVLVVHIPPEQLKNGLSTFLRELSSVLHTNVVFRRDANGEPMVFPY
YGSEQELAKHNVKRSTDSWPDWAVVPANMLGQVKESVGSMVNLPRQRRELDLMQVKGSVV
YLEIDNRQCYQQSTECFQSATDVAAFLGALASSGNLNVPYIEAVTSVQPTPASSELYPMY
VVFLGLAVLGFICLGVLVSRKRRREHGQLWFPEGFKVSEPSKKKRREPVGEDSVGLKPLK
NILDISLMDDNQNGLWGEEEPDSRRFRFEEQAVLDLGDRTDHRQWTQQHLDAADLRIPSI
APTPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIISDFIYQG
ANLHNQTDRTGETALHLAARYARSDAAKRLLESTADANVQDNMGRTPLHAAVAADAQGVF
QILIRNRATDLDARMHDGTTPLILAARLAVEGMVDELINCHADANAIDDFGKSALHWASA
VNNVDAAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKILLEHFANREITDHLDQLP
RDIAQERMHHDIIRLLDEYNLVRSPGLHNGTLSATNLSPPLCSPNGYLGSLKPTAPGKKV
RKPGSGGKDGGKDMRIRKKKSLDGKGSLLDSSAVLSPVDSLESPHGYLSDVASPPMTSPF
QQSPPMSFNHLQGSGDSHVGQMGMGKGQDMGRMPFDPNPPRLSHLPVSSPGSQGTITMAM
GGAGGRGQCDWHSRIHPGLGQQGGFNQGLPMSHGMMAPLRGVPTATLSRIMGYQGLQTSH
LGTPPHLMQQMHSRQNPQLQHQNSNSTTAGQVLNQSFLSSELSGSDLQQGNGVGRSIPIH
TILPQETQILGTQFLTPPSQHSYSGPIDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHS
NMSDWSEGISSPPMSLHSQMGLIPNQFK
NT seq
7467 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgaaactaacgtttcttattccagtcatcgtcataacacaaggt
ctaagatgctctctaactactgaatcatgtctgaatggagggaggtgtgaggcctcctct
gacagaaatggagaatgcaggtgtacaagtgactatgtgggtagccgctgccagtactcc
aacccctgcaacccctcgccatgccgcaacgggggcgagtgccgcgccgtatcccacggc
aacacttttgagttccactgcaaatgtcgactgggcttctccgaccagctgtgcctgacg
cctaccaaccatgcctgcatgagttcgccatgtcgcaatggagggacttgtgacctgatc
acgctctccgactaccgctgccgctgcccacccggatggtcagggaagacatgccagatt
gccaacccctgtgcatccaacccctgtgccaacggtggacaatgctcacccttcgagtcc
cactacatctgcgcatgcctgcccgcctttcatggccagacctgcaagctggacgtcaat
gagtgtgcccagatgtcgtcaccctgtcgcaacgggggcatgtgtgtgaatgaggtgggc
tcctaccactgccgctgcccccaggagtacacgggtgccaactgcgagaccccctacatg
ccctgcaacccctctccctgccacagtgggggcacttgcgtgcagaagggggacaccagc
tatgactgcagctgcctgccaggatttacaagtcagaattgtgatcacaacattgatgac
tgcccaggccacaactgtcagaatggtggcttgtgtgtggatggggtcaacacctacaac
tgccagtgcccccctcactttacaggccagttctgtaccgagaatgtggatgagtgtgag
atgatgccaaacacgtgccagaacggcggtacctgccacgacacctatggcagctttcac
tgtgtctgtgtcaatggctggacgggcgatgactgcagtgagaacatcgacgactgtgcc
agcgcagcctgttatcacggcgccacatgccacgaccgcgtagcctccttcttctgcgag
tgtccacatgggcgcacaggtttactgtgtcatcttgatgatgcctgcatcagtaacccg
tgtcaaaaaggctctaactgtgacaccaatcctgtcaacgggaaagccatctgtacctgc
cctccaggttacactggctctgcatgcaaccaggacattgacgagtgttccttaggcgcc
aacccttgcgagcacggtgggcgctgcctgaacactaaaggctcgttccagtgcaagtgt
ctccagggttatgagggcccgcggtgcgagatggatgtcaacgagtgcatgtccaacccc
tgtcagaacgatgccacatgcctggaccaaattggaggattccactgcatctgcatgcca
ggttatgagggggtgttttgccagatcaacactgacgagtgtgccagcatgccctgtctg
aacaacgggaagtgcatcgacaggatcaactccttccactgcgagtgccacaaaggcttc
tctggtggtctatgtcaggttgacatcgatgagtgtgccagcacgccctgcatgaacgga
gccaagtgtaccgacggccctaacaagtactcatgtgaatgcactgaaggttactctgga
cagcactgtgagactgacatcaacgagtgttactcggacccctgtcactatggcacgtgt
aaggacggcctggccaccttcacctgctactgtcaccctggttacacgggccgcctgtgt
gagaccaacatcaatgagtgtctcagccagccatgtcagaacggaggcacctgtcaggac
agggagaacacttacatctgcacctgccccaagggcactgcaggctttaactgtgaggtg
aatctggatgactgtaagagcaagccctgtgactacgggaggtgcattgacaagatcaac
agctatgagtgtgcatgtgagccaggttacgcaggcgccatgtgcaacatcaataccgat
gagtgtgccatcaacccctgtcacaatggtggcacctgcatcgatggcatcaacagcttc
acatgcctgtgcccagagggctacagtgatgccacctgtctgttgcaggtggacgagtgt
ggcagcaacccctgcattcatggtcgctgccaggatctgctcaatggctacaggtgtttc
tgtgactctggctggggtgggcctaactgtgacatcaacaacaacgagtgtgagtccaac
ccgtgtatgaacggtggcacctgcaaggatatgaccagtggatatgtttgtagctgccga
gccggcttcagtggacctaactgccaaactaacatcaacgagtgtgcctccaacccctgc
ctgaaccagggcacctgcattgacgatgtggccggctacaagtgcaactgcttactgccc
tataccggtgagatgtgtgagacactgctggccccatgcagccccatgcagccctgtaag
aacagtggagtgtgtcatgagtcagaggactaccagagcttctcctgcctctgtccagag
ggatggcaaggtcaaacatgcgagatagatatcaacgaatgtgtgaaaagtccttgccgc
agcggcgccacatgccacaacatggtgggcagctaccgatgcagctgccgtccgggctac
accggccagaagtgtgagacggacatcgacgactgcaagcccaacccctgcagtaatgga
ggtctgtgcagagatggagtggacagctttgtgtgcacttgtctgccagggttccgtggt
ggcaggtgtgagcatgacattaatgagtgcgagagcaacccgtgtaagaatggggccaac
tgcacagactgtgtcaactcctacacctgcacctgtccacccggtttcagtggcatcaac
tgcgagaataacacccccgactgcacagagagctcttgcttcaacggtggcacctgcgtg
gatggcatcaacaccttcacctgcctgtgtctgccaggcttcacaggcagctactgccag
cacgacatcaatgagtgtgactccaagccctgcctcaatggtggcacctgtctggacagc
tacggcacctacaagtgtacctgctctcatggctacactggagtcaactgccagaacctg
gtgcggtggtgtgactcatctccctgtaagaatggaggctcatgttggcagcagggctcc
tcgtacacctgtcagtgtcagacgggatggaccggcctctactgtgacgtccccagtgtc
tcctgcgaggtggctgccaaacagcaaggtgtggaggtggctcacctgtgtcgtaactcg
ggccagtgtctggatgctggcaacacccactactgccgctgccaggcgggctacatgggc
agctactgccaggaacaggtggacgagtgctcccccaacccttgccagaacggtgccacc
tgcacagactacctgggagggtacagttgtgagtgtcttcctgggtaccacggggtgaac
tgctccaaggagatcaacgaatgtctgtctcagccctgtcagcacgggggcacctgcatc
gacctcataaacacctacaaatgctcctgtcccagaggaacacaaggcattcactgtgag
atcaacctggatgactgcaacccctctacagaccctctgaccaatgagcccaagtgtttc
aacaagggtcagtgtgtggacagagtggggggctaccactgcatgtgccccgctggctac
gtaggggagcgctgcgagggtgacgtcaacgagtgcctgtcggacccctgcgacctgcga
ggctcctacaactgtgtccagctcaccaacagctaccgctgcgagtgtcgcactggatac
acaggccagcgctgtgacaaggtgtttgatggctgtaaggggagaccatgtaggaacgga
ggaatgtgtgcagtggccagtaacaaccccgacggattcatctgcaaatgcccaccgggt
tacacaggctcctcctgcgaatatgactcacgcttctgtggtaacctcaactgcagaaat
ggtggcacctgtgtctctggccacctgagccctcgttgcttgtgccccacggcttttacc
ggccctgagtgccagactcccacgaacagcccctgcaacgtcaaccactgctacaacggg
ggcacttgccagagaacccccgatgcacccttcttccactgcagctgcccgaacaacttc
aatggcctgctctgccacatccttgattactcctttcccggtgggttcggccgggacatc
acaccaccacccgaggtagaggtgagctgcgagatcccgcagtgcgacgagtgggcgggc
aaccacatctgtgactcgctgtgcaacaaccacgcctgcggctgggacggtggcgactgc
tcgctcaacttcgatgacccatggcagaactgctcggcagctctgcagtgctggcggtac
ttcaatgacgggaagtgcgacgaacagtgcaaaagccctgggtgtctctacgacggcttc
gactgccagggacaggagggacagtgcaacccgctgtatgaccagtactgtaaggaccac
tacgcggacggccactgcgaccagggctgtaacaacgcagagtgcgagtgggacggcctg
gactgcgccaacaacatgcccgagaagctagctgacggccacctggtccttgtggtccac
atcccccccgagcagctaaaaaatggtttgtccacgttcctccgtgagctcagcagcgtt
ttgcacaccaacgtggtgttccggcgcgacgcaaacggagagcccatggtgttcccttac
tatggcagcgagcaggagctggccaagcacaacgtgaagcgttccaccgacagctggcct
gactgggcggtcgtgccggccaacatgctcggccaggtgaaggagagcgtggggtccatg
gtgaacctgccccgccagcgccgagaattggacctcatgcaggtcaaagggtcggtggta
tacctggagattgataaccgccagtgctaccagcagtccacggaatgcttccagagcgcc
accgacgtcgccgcgttcctgggagcgctggcctccagcgggaacctcaatgttccttac
atcgaggcagtcaccagtgtgcagcccacccctgcatcctctgagctatacccaatgtac
gtggtgttcctggggctggctgtactgggcttcatctgcctgggggtgctggtgtcacgt
aaacgccgacgggagcacggacagctatggttccctgagggcttcaaagtttctgagccc
agcaagaagaaacgcagagagcccgtaggagaggactctgtgggactcaagccactgaag
aacattttggacatttctctgatggacgacaaccagaatggattgtggggagaggaggag
ccagactcgagacgctttaggtttgaggagcaggccgtgttggacctaggtgaccgcact
gaccacagacagtggacccagcaacacctggacgcggctgacctgcggatcccttccatc
gcccccacgcctccccagggagagatcgagaatgactgcatggacgtcaatgtccgaggc
ccagatggtttcactcctctaatgatcgcatcgtgcagcggaggaggcttggagacgggg
aacagtgaggaggaggaggacccttcggctgagatcatctctgacttcatctaccagggc
gccaacctgcacaaccagacggaccgaaccggcgagaccgctcttcacctggccgcccgc
tacgcccgttccgacgccgccaagcgactgctggagtccaccgccgacgccaatgtccag
gacaacatggggcgcactccactgcatgctgctgttgctgcagacgcacagggagtattc
cagattctgatccggaaccgggcaactgatcttgacgcccgcatgcatgatggaacaact
cctctgatcctggctgcccgattggctgtggaaggcatggtggatgagcttatcaactgc
catgctgatgccaacgccatcgatgactttggtaaatctgcccttcattgggcttcagct
gtcaacaacgtggatgctgccatggtgttgttgaagaatggcgccaacaaagacatgcag
aacaataaggaggaaactcctctctttctggcagccagagagggcagttatgagacggcc
aagatactgctggagcactttgccaaccgtgagatcaccgaccacctggaccagctgccc
cgggacatcgcccaggagcgaatgcaccatgacatcatccgtctgctcgatgaatacaac
ctggtgaggagcccagggctccataatgggaccctgagcgccactaacctgtctcctcct
ctgtgctcccccaacggatacctgggcagcctcaagcccaccgccccgggcaagaaggtc
cgcaagccaggctctggagggaaggatggtggcaaagatatgaggatacggaagaagaag
tccctggatgggaagggcagtctgctggacagctcagccgttctctcgcccgtcgactcc
ctggagtcgccccacgggtacctgtccgacgtggcgtcgccaccaatgacatcgccattc
cagcagtctcctcccatgtcgttcaaccacctgcaaggcagtggagacagccacgttggt
cagatgggcatgggcaaggggcaggacatggggcgtatgccctttgacccgaaccctccc
cgcctgtcccacctgcctgtttccagccccggcagccagggaaccatcactatggccatg
ggcggagctgggggaagaggacagtgtgattggcactccaggatacacccgggtctcggg
cagcagggtggctttaaccaaggccttcccatgtcccatggtatgatggctcccctccgc
ggggtccccactgccaccctgtcccggatcatgggctaccagggcctgcagaccagccat
ctgggcacgccgccccacctcatgcagcagatgcactcccggcagaacccgcagctccag
caccagaactccaactccaccacggctggccaggtcctgaaccagagtttcctgagcagc
gagctgagcggctcggacctgcagcagggcaacggggtgggtcgctcgatccccatccac
accatcctcccccaggagacccagattctcggcacacagttcctcaccccaccctcccag
cacagctattccggcccaatagacaacacacccaatcaccagctgcaggtgcctgaccac
ccctttctaactccctcacccggatcccctgaccaatggtctagctcctctccacattcc
aatatgtctgattggtcagagggcatctccagtcctccaatgagtttgcattctcagatg
ggacttatccctaaccagtttaagtag
DBGET
integrated database retrieval system
