Oncorhynchus kisutch (coho salmon): 109883020
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Entry
109883020 CDS
T09179
Name
(RefSeq) RING finger protein 37-like
KO
K10600
U-box domain-containing protein 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109883020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109883020
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
U-box type E3
109883020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5918
U-box
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
109883020
NCBI-ProteinID:
XP_020330673
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Position
LG3:40728553..40734016
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AA seq
747 aa
AA seq
DB search
MPKWSLQRKAQVIVSSYISDSSCELFYENISRKHESVKTMVVNLCLPHFKTTIQCDKLCA
DGYDVTNLLSADPTVRRRGFKLEYFLRPPVQVTLQFGFQVEVCRVDVELWPWGMDRGQAC
KRLEISTSSDPPLPHNHSLEQGQSQVQQGQEKGQQWDQAKSQFKGHQWSLQAQQWSLQGQ
EKSQQWAQRGQTQSHTDTSQGDFRLVGRCELREETHVSFSHPCFRPRPPFPSLPPPPREG
CRQEELWSRGPLSLGSVKQLRVSVPYGAGASAMGLKALAVWGLPSRCCPPEEAERVRIAH
ENASLRPAPQLSHLASAQSPPVVQPQPLSQTTTATSLLQVPEDFLDPLTQEVMLLPMLLP
SGVSVDSSTLEEYQRREATWGRVPNDPFTGVPFIPEAQALPNPHLKSRIDRFLLQTGLEV
REGMVGRQVQGESPHTSRLIPPERTGDSGDSAVTTAAAAIESANHQGVLSRNSGTLTQTT
QKRAESVNTERSHSTQQRGIGAFNNRVKNGKDRCAGKVGHKEGVVDRVSPQDIGPDLGSR
RKRELEVWATLIRSKGKGEPTAAKAASASAGHAKELLPDSKRLRTDTNSTISTATVPSGS
SHEHCSSASLDHEQRLSASLDQALLSALQGRPSFTSYTSQTPQVQHKHTDTPADTPTAFP
ISLLPPLLSPLPFLSLPGENRCGSCSCSLSVYSTSPSAYRLPCGHFLCRPCLHRKSRPLV
TTAMPNHILCPTCNIPASSSNITRVHH
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagtggtccctccagagaaaagctcaagtgattgtatcttcatatatttcagac
agttcgtgtgagctcttctacgagaacattagcaggaagcacgaaagtgtgaagaccatg
gtggtgaatctctgcctgccacatttcaagaccaccatccagtgtgacaagctgtgtgca
gatgggtatgacgtcaccaacctcctatcggccgacccaacagtccggaggcggggtttt
aagctggagtacttccttcggccacccgttcaggtgacactgcagtttggtttccaggtg
gaagtgtgtcgggtggatgtggagctgtggccctgggggatggaccgtggacaggcctgc
aagaggctggagatcagcaccagctctgatcccccactccctcacaaccacagcctagag
cagggccaaagtcaggtccaacaaggccaagagaagggccagcaatgggatcaagccaag
tcccaattcaaaggccaccaatggagcctccaggcccaacaatggagcctacaaggccag
gagaagagccagcaatgggcccaacgtggccaaactcagagtcacacagacaccagccag
ggggatttccgcctagtgggacgctgtgaactaagagaagagacccatgtcagtttctcc
catccctgtttccgcccgcgccctccctttccctccctgccaccgcccccccgagagggg
tgtagacaagaggagctgtggagcagggggccgctctcactaggctctgtgaagcagctc
cgtgtgtcagtgccgtacggtgcgggtgcctccgcgatggggctcaaggcactggcagtg
tgggggctgccttctcgctgctgccctccagaggaggcggagagggtgagaatagcacat
gagaatgctagcctgagaccagcgccacagcttagccacttggcatcggcgcagtctcca
cctgtcgttcaaccacagccactgtcacagacgacaacagcaactagcctcctgcaggtc
cctgaggatttcctggaccccctgacccaggaagtgatgctgctccctatgctgctgccc
agcggagtgtctgtggacagctccactctggaggagtaccagaggagggaagctacctgg
ggtcgtgtccccaacgaccccttcaccggtgtccccttcatccctgaggcacaggctctc
cccaacccccacctgaagagccgcattgaccgcttcctgcttcagacagggttagaggtc
agggaggggatggtggggaggcaggttcagggggagagtccgcacacctccaggctcata
cccccagagaggactggggacagtggggactctgctgtcactactgctgctgctgctata
gagtcagccaaccaccagggtgtacttagcagaaacagtgggacactcacacagactacc
caaaaacgtgcagaaagtgtaaatactgagaggagccactctacacagcaaaggggaatc
ggagcttttaacaacagggtgaagaatgggaaggaccggtgtgctggtaaagttggtcat
aaagaaggggtagtggatagagtgagtccccaggatataggaccagatttggggagtagg
aggaagagagagctggaggtttgggccactctgatccgctctaagggaaagggtgagccc
accgcggccaaagcagcctctgctagtgctggtcacgccaaggagctacttcctgattcg
aaaagactaagaacagacacaaactccactatctccacagccaccgttcccagcggtagc
tcccatgagcattgttcgtctgccagtctagaccatgagcagcgtttgtctgccagtcta
gaccaggcccttctctcagccctgcagggtcgaccctcctttacctcctacacctcccaa
accccccaggtccaacacaaacacacagacacacccgctgacaccccaacagcttttcct
atttctctccttcccccccttctctctccccttccctttctctctctcccaggtgagaac
aggtgtggttcatgttcctgctctctgtccgtctactcgacctctccgtcagcataccgc
ctgccctgtggtcacttcctgtgccgcccctgcctacacaggaagtcccgcccacttgtc
accacagcaatgcccaatcacatcctatgtcccacctgcaatatccctgcctcttccagt
aacatcacacgcgtgcatcactga
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