Oncorhynchus kisutch (coho salmon): 109883060
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Entry
109883060 CDS
T09179
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109883060
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109883060
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109883060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109883060
NCBI-ProteinID:
XP_031688108
Ensembl:
ENSOKIG00005005486
UniProt:
A0A8C7D6K0
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Position
LG1:complement(72700951..72711095)
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AA seq
661 aa
AA seq
DB search
MRGSSSYGDRDRDRGRDRGPRFGSSSWGGPPPMKKFGNPGERLRKKKWDLDELPKFEKNF
YNEHPELQRMTQYDIDEFRRRKEITVRGTGCPRAITGFHQAQFPQYVMDVLLSQDFKEPT
SIQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVARDYGKTSRIKSTCVYGGAPKGPQIRDLERGTEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDYV
QINVGALELSANHNILQIVDVCMENEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDELT
RRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDIKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVNSG
HGGGGGGRMRYRGGGSSANNPNMMFQDVCERRLRSVSGGNKPDSRGSSFSRDGRSGGGRD
GDPRSSSSSSNRDRSRVSRGSYGSGGADQYQSYGGGGGTQYSSRVGGAANGAPRGSSGGG
QNRSSQPQGVFGPAPPPPVGPKPLMAQLMAPPQPPLMSFIGQPPYPFSPHPPPPPTPPPR
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagttcgtcgtacggagaccgagatagagaccgtggacgagacagagggcct
cggtttgggtccagtagctggggcggccctccccctatgaagaagtttgggaatcctgga
gaacgccttcgcaagaagaagtgggatctggacgagctgcccaagtttgagaagaacttc
tacaacgagcacccagagctccagcgcatgactcagtatgacatagatgagttccgcagg
aggaaggagatcacagtcagaggtactggctgccccagggccatcaccggcttccaccaa
gcacagtttccccagtatgtaatggatgtgctactgagtcaggacttcaaggagcccaca
tccatccagtcacagggcttccctctggccctgagtggcagggacatggtgggcatcgct
cagactggctccggcaagaccctggcatatctgcttcctgccattgtgcacatcaaccat
cagccctatctagagaggggagacggacctatttgcctggtcctggccccgaccagagag
ttggcccagcaggtgcagcaggtggctcgtgattatggcaagacctcccgcatcaagagt
acctgtgtctatggaggagcacccaagggaccgcagatacgtgacctggagagaggtaca
gagatctgcatcgccaccccggggcgtctcatagacttcctggaggcagggaagaccaac
ctgcggcgctgcacctacctggtcctggatgaggctgaccgcatgctggacatgggcttc
gaaccacagatacgcaagatcgtggaccagatccggccggaccgccagactctgatgtgg
agtgccacctggcccaaggacgtgcgtcagctggcagaggacttcctgcgggattatgtc
cagatcaacgtaggagctctggagctcagcgccaaccacaacatcctgcagatagtagac
gtctgcatggagaacgagaaggacaacaagctgctccagctgatggaagagatcatggct
gagaaggagaacaagaccatcatctttgtggagacaaagaagcgctgtgatgagctcacc
cgcaggatgagaagagatgggtggccagccatgtgtatccatggggacaagagccagcca
gagagagactgggttctgacagaattccgtagcggcaaagcccctatcctcatcgccact
gatgtggcgtctcgcggtctggacgtggaggatatcaagtttgtcatcaactatgactac
cccaactcgtctgaggactacgtgcacaggatcggccgtacggcccgcagcaccaacaag
ggcacggcctacacctttttcaccccgggtaacctgcgccaggccagggacctggtccga
gtcctggaggaggcccggcaggccatcaatcccaaactgctgcagctggttaactctgga
catgggggaggaggtggtggcaggatgcgttaccgtggcggcggctccagcgccaacaac
cccaacatgatgttccaggacgtgtgtgagcgtcgcttgcgctccgtcagcgggggcaac
aagccagacagccgcggcagcagttttagccgggacgggcgcagtggcgggggtcgggac
ggagaccctaggtcctcgtcctcttcctccaacagggaccgaagcagggtcagccggggg
agttacggctccgggggggctgaccaataccagagctatggtggtggtggtggtacccag
tacagctccagggttgggggagcagctaatggggcccctaggggtagtagtggtgggggc
cagaatcggtccagtcagccccagggtgtgttcggtccagctcctccacctccagtaggg
cccaagcccctcatggcccagctgatggccccgccacagccccctctcatgagcttcata
gggcagcctccataccccttttctcctcacccgccaccgcctcctacacccccacccagg
aagtag
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