Oncorhynchus kisutch (coho salmon): 109883093
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Entry
109883093 CDS
T09179
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109883093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109883093
03036 Chromosome and associated proteins [BR:
oki03036
]
109883093
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109883093
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109883093
Chromatin remodeling factors
BAF complex
109883093
PBAF complex
109883093
GBAF(ncBAF) complex
109883093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
109883093
NCBI-ProteinID:
XP_020330730
Ensembl:
ENSOKIG00005017216
UniProt:
A0A8C7GD64
LinkDB
All DBs
Position
LG6:77648488..77667329
Genome browser
AA seq
1634 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMRGPSPSPGSAHSMMGPSPGPPASGHSHPQQGPS
VYPQENMHQMHKPMEGMHEKGMSDDPRYGPMKSMGMRPGGGHIGMGPPPSPMDQHSQGYP
SPLGGSEHSPSPVPANGPPAGPMMPSGPGVPMEGGDPQSMGQQNRVGVPGPSGGSGPGGV
GPGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPDHLQMAVQGKRPMPGMQQQPGMPNMPP
SSGPGAGPGQPPANYNRPHGMVGPNMPPPGPSGVLPGMQGQPTNGPPKQWPEGPMVNAAA
PSSAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPLQPPPMVLHQKQNRITPI
QKPRGLDPVEILQEREYRLQARITHRIQELEHLPGSLAGDLRTKANIELKALRLLNFQRQ
LRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEY
LNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERIEKERMRRLMAEDE
EGYRKLIDQKKDKRLAYLLQQTDEYVANLTDLVRAHKADQALKDKKKKKKKKKKKKPESG
EGQPPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGLDAPRAGQLDTWLEMNPGYEVA
PRSDSEDSGSEEEEEEEEEPQPSQAPTEEKKKIPDPDTEDVSEVDVRYIIEGAKQDVDDE
YNSAEAAFARGLQSYYAVAHAVTETVDKQSTLLVNGQLKHYQIKGLEWLVSLYNNNLNGI
LADEMGLGKTIQTIGLITYLMEHKRINGPFLIIVPLSTLSNWVYEFDKWAPTVVKVSYKG
SPQARRAFLPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTVV
LNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCTTFEQWFNAPFAMTGEKVDL
NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQRVLYRHMQAKGV
LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGVVSGPDLY
RAAGKFELLDRILPKLMVTDHKVLLFCQMTSTMTIMEDYFGWRNFKYLRLDGTTKAEDRG
MLLKTFNDPASQYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQR
NEVRVLRLCTVQSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQ
DEVGAPGGWRAGGALEEDEVPDDETVNQMIARSEEEFDQFMRMDLDRRREDARNPKRKPR
LMEDDELPTWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEDGN
LEDLEEEVRHKKTTRKRKRDRDDMPGSATPSSSGGRSRDKDEEVKKAKKRGRPPAEKLSP
NPPSLTKKMKKVVDTVIKYKDGSNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKER
IRSHKYRSLNDLEKDVMLLCSNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEKEEESE
GEESEEEEEEVDEGSESESRSVKVKIKLGRKEKEGRGKGQRRRGRGSRAKPVVSDDDSEE
EQEEAGSVSGSEED
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagacccccccatgggaggaacgcctcggccgggcccctccccaggaccg
gggccttctccaggagccatgaggggacccagcccttccccaggctctgctcatagcatg
atgggacccagcccaggtcccccagcctctggacactcccacccacaacagggtccctca
gtatatcctcaggagaatatgcatcagatgcacaaacctatggaaggcatgcatgagaag
ggcatgtctgatgaccctcgctatggaccaatgaagagcatgggcatgagaccaggtgga
ggccacattggaatgggaccccctcctagccccatggatcaacattcacaaggctacccc
tctccactggggggatctgagcactctcccagccctgtgccagccaacggccctcccgct
ggccccatgatgccctctggcccaggtgtccccatggagggcggtgacccccagtccatg
ggccagcagaaccgtgttggggtcccaggtccaagtggtggttctgggccaggcggggtt
gggcctggtggacccacccccttcaaccaaaaccagctacaccagctcagggctcagatc
atggcctacaagatgctggctcgcagccagcccctaccagaccacctgcagatggctgtg
cagggtaagaggcccatgccagggatgcagcagcagccagggatgcccaacatgccccca
tcctctgggcctggagcggggcctggacagccaccagcaaactacaacagacctcatgga
atggtaggcccaaacatgcctcctccaggaccctcaggtgttcttcctggtatgcagggc
cagcccaccaatggcccccctaaacaatggcccgaagggcccatggtgaatgctgctgct
ccatccagtgccccccagaagctgattccccctcagcccactggcagaccctcccctgct
cccccctctgtgccccctgctgcctccccggtaatgcccccccagacccagtcccctggg
cagcccctccagcccccacccatggtgctgcaccagaaacagaaccgcatcacgcccatc
cagaagccccgtggcctggacccagtagagatcctccaggagagagagtacaggctgcag
gctcgtatcacccaccgtatccaggagctggagcatctaccagggtctctggccggagac
ctgcgcaccaaagccaacatcgagctcaaggccctgaggctgctaaatttccagagacag
ctgcgtcaggaggtagtggtgtgtatgcgtcgtgacacggccctggagacggccctcaac
gctaaggcctacaagcgcagcaagcggcagtccctccgcgaggcccgcatcacagagaaa
ctggagaagcaacagaagattgaacaggagcgcaaacgacgccagaaacaccaggaatac
cttaacagcatcctgcagcatgctaaagacttcaaggagtaccaccgctccatcacagcc
aagctccagaaggccaccaaagctgtggccacgtaccacgccaacactgagcgtgagcag
aagaaggagaacgagcgcattgagaaggagagaatgaggaggctgatggctgaagatgag
gagggctaccgtaagctgattgaccagaagaaagacaagcgcctggcctacctgctgcag
cagacagacgagtacgtggccaacctcaccgatctggtcagagcccacaaggctgatcag
gccctcaaggataagaagaagaagaaaaagaagaagaagaagaagaagccagagagtggg
gagggccagcctcctgccctgggacccgacggagagcctctggatgagaccagtcagatg
agtgacctgcctgtgaaggtgatccatgtagatagtgggaagatcctgacggggctggat
gcgccccgggctggccagctggacacctggctggagatgaatcctgggtatgaagtggcc
cctcgttcagacagcgaggacagtggctcagaggaagaggaggaggaagaggaggagccc
cagccctcccaggctcccactgaggagaaaaagaaaatcccagaccccgacacagaggac
gtgtcggaggtcgacgtccgctacatcatcgagggagccaagcaggatgtggatgatgag
tataacagtgccgaggcggcgttcgcccgaggcctgcagtcttactatgctgtggcccac
gccgtcactgagacggtggacaaacagtccacgctgctggtcaacggacagctcaaacat
taccagatcaagggcttggagtggctggtgtctctgtataacaacaacctgaatgggatc
ctggctgatgagatgggtctgggcaagaccatccagaccattggcctcatcacctacctc
atggagcacaagcgcatcaacggccccttcctcatcatcgtgcccctctcaactctgtcc
aactgggtgtatgagtttgataagtgggctccaacggtggtgaaagtctcttacaaaggc
tccccacaagctcgccgggcattcctccccatcctgcgcagcggcaagttcaatgtactg
ctcaccacctacgagtacatcatcaaagacaagcaagtgctggctaagctgcgatggaag
tacatgatagtggacgagggccaccgtatgaaaaaccaccactgtaagctgactgtggtt
ctgaacacccactacctggccccgcggcgtctgctgctgaccggcaccccgctgcagaac
aagctgccggagctctgggccctgctcaacttcctgctgccgaccatcttcaagtcctgc
acaaccttcgagcagtggttcaacgcccccttcgccatgaccggagagaaggtggatctg
aacgaggaagagaccatcctgattatccgtcgtttgcacaaagtgctccgccccttcctg
ctgcgcagactgaaaaaggaagtggagtcccagctgcctgagaaggtggagtatgtgatc
aagtgtgacatgtcggccctgcagagagttctgtacagacacatgcaggctaagggtgtg
ctgctcaccgacggctctgagaaagacaagaagggtaaaggaggcaccaagaccctgatg
aacaccatcatgcagctgaggaagatctgtaaccatccctacatgttccagcagatcgag
gagtccttctctgagcatttgggattcactggaggcgtagtgtctggacctgacctgtac
cgcgccgctgggaagtttgagctgctagaccgtatcctgcccaagctgatggtcaccgac
cacaaggtcctgctcttctgtcagatgacttccaccatgaccatcatggaggactacttt
ggctggcgcaactttaagtacctgcgtctggacggaaccaccaaggctgaggatcgtggg
atgcttttgaagacattcaatgaccccgcctctcagtactttgtgttcctgctcagcacc
agggccggcgggctgggcctcaaccttcagtctgctgacactgtggtcatctttgactct
gactggaacccacatcaggatctgcaggcccaggacagagcccaccgtatcgggcagcgg
aacgaggtgcgtgtgttgcgtctctgcaccgttcaaagtgtggaggagaagatcctggcg
gcggccaagtacaagctgaacgtggaccagaaggtcatccaggccggcatgttcgaccag
aagtcgtcgagtcacgagcgccgtgccttcctgcaggccatcctggagcatgaggaacag
gacgaggtcggggccccggggggctggcgcgctgggggggcgttggaggaggacgaggtg
cctgatgatgagaccgtcaaccagatgattgccagaagcgaggaggagtttgaccagttc
atgcgtatggacctggaccggcgccgcgaggacgcccgcaaccccaagagaaagccccgt
ctgatggaggatgacgagctgcccacctggatcctaaaggatgatgccgaggtggagagg
ctcacctgtgaggaggaggaggagaagatgtttggtcgcggctctcgccagcgcaaggag
gtggactacagcgactcactcacagagaagcagtggctcaaggccatagaggacggtaat
ctggaggacctcgaggaggaggtgcgtcacaagaagacgacccggaagcgcaagcgagac
cgtgacgatatgcccggctcggccacgcccagctccagcggtggtcgcagccgtgacaag
gatgaggaggtaaagaaggccaagaaacgcgggcgccctccagctgaaaaactgtcccct
aaccccccatccctcaccaagaagatgaagaaggtggtggacactgtcatcaagtacaag
gacggcagcaatgggcgccagctgagtgaagtcttcatccagctgccctcgcgcaaggag
ttgcctgagtactacgagctcatccgcaaacctgtcgacttcaggaagattaaggagagg
atccgcagccataagtaccgcagcctgaatgacctggagaaggatgtgatgctgctgtgt
agtaacgctcagaccttcaacctggagggctctctgatctatgaggactccatcgtactg
cagtcagtcttcaccagcgtccggcagaagattgaaaaggagaaggaggaggagagtgag
ggagaggagagtgaagaagaagaggaggaggtggacgaaggctctgagtctgaatctcgt
tcagtgaaggtgaagattaagctggggaggaaggagaaggagggcagagggaagggccag
cgccggaggggccgtggctcccgggccaaacctgtggtgagcgacgacgacagcgaggag
gagcaggaggaggcgggttcggtcagcggcagtgaggaggactga
DBGET
integrated database retrieval system
