Oncorhynchus kisutch (coho salmon): 109883153
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Entry
109883153 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109883153
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109883153
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109883153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
109883153
NCBI-ProteinID:
XP_031653567
Ensembl:
ENSOKIG00005020647
UniProt:
A0A8C7H0F1
LinkDB
All DBs
Position
LG19:67077622..67085178
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AA seq
779 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQPSINTSETGEATGEPTEPAEGPEDPSNGDTLLDWLNTVRRT
GNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARAEGETGEGEAQEEGP
AEAPGDGVEAVVGVEVQAGTGAGTGAGTGAGTGAGTGAGTGAGTEAGTEAGTEAGTEAGT
EAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTGAPMETGEVLEEPVVEEMAV
IVEPEAEMEPEAEVEAEMVPELVVEVVPQPPSPVTATPPVSRPASPLVQAAPAPPSPPPE
EPPRRGQRRARSRSPEQRRTRARTTRSRSPLTLDRLDGLPRHVSNTAPSHSPPTLPPQAP
AEGSSRTRQHVLSRQSTAEYEVQSAGTGSGNAPEPVTTPPQEGEAAGGEGAAGRRPPTIM
LDLQVRRVRPGEYRQRDSIANRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVS
TIRIPIRRISDAGLGEATSMALQTMIRQIMTGFGELSYFMDSDSDSSDSNRGGGNPTGAA
DLAEALNTPDGGVAGMAEGAEPPVSVGGPSVGGAGEARTEEGEEGVGVGLAPGIGLGVGG
TPREGRARPRAPISLEEPGSLPFLRLAHFFLLNDEDEEQPRGLTKEQIDNLSTRNFGESD
ALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggctcagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttgttgagtcggctgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaaccgacagaacctgcggaaggt
ccagaggacccgtctaacggcgacaccctcttggattggctgaacaccgtcaggcggaca
ggcaacaccacccgcagtggtcaccgaggcaaccagtcatggcgggcagtgagccggacc
aacccaaacagcggagacttccggttcagtctggagatcaacgttaaccgtaacctggct
gagcagcaggcccgcgcggagggggagacgggcgagggggaggcccaggaggaaggccca
gcagaagcacctggcgatggggtggaggcagtggtcggagtggaggtccaggcagggact
ggggcagggactggggcagggactggggcagggactggggcagggactggggcagggact
ggggcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggact
gaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggact
gaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggact
ggggcgcccatggagacaggagaggtgctggaggaaccagttgtggaggagatggctgtc
atagtggaaccagaagcggagatggagccagaggctgaagtagaagcagagatggtccca
gagttagtagtagaggtagtcccacagccgcccagccctgtcaccgccacccctcctgtc
tccagaccggccagtcccctggtacaggccgcccccgccccccccagcccgccccctgag
gagcctccccgacgtggccagagacgagcccgcagccgtagccctgagcagcgccggacc
agggctcgcaccacacggagccgttcccctctcaccctggaccgactggacggcctcccc
cgccacgtgtccaacaccgccccttcacacagcccccccaccctgcccccccaggccccg
gcagagggaagctcacggactcgacagcatgttctgtcccggcaaagcactgcagagtac
gaagtccagtcagccggaacagggtctgggaacgccccagagcccgttaccaccccaccc
caggagggagaggccgcgggcggggagggagcagcaggacgacgcccccccactatcatg
ctggacctgcaggtgcgtcgtgttcgtccaggtgagtaccgtcagagggacagcattgct
aacagaacccgctcacgctcccagaactccaacaacaccttcctgtacgagagtgagagg
ggggggttccgcaggaccttctcccggtccgagcgtgcgggtgtgaggacgtacgtcagc
accatcaggatccccatcaggaggatcagtgatgcagggttgggagaggccacctccatg
gctctgcagaccatgatacgacagatcatgactggcttcggagagctcagctacttcatg
gactcagactctgactcctcggactcaaaccgtggcggtggtaaccccactggcgctgcc
gacctagcagaggcgctcaacactcccgacgggggagtagctggtatggcggagggggcg
gagcctcctgtctcagtgggtgggcctagtgtgggaggagctggggaggcaaggacagag
gagggggaagagggggttggtgtaggtctggccccagggataggtttaggggtggggggc
acccccagggaggggcgagctcggccccgtgcccccatcagtctggaggaaccagggtca
ctacccttcctccgccttgctcacttcttcctcctgaatgatgaggatgaggaacagccc
agaggactcaccaaggagcagatcgacaacctctccaccaggaactttggggagagtgat
gctctgaagacctgcagtgtgtgtatcacagagtatgctgaggggaacaagttgaggaag
ttgccctgttctcatgagtaccatgttcactgtatcgaccgctggttgtctgagaactcc
acctgtcctatctgccgcagggccgtgttggtgtctgctaaccgggagagtgtggtctaa
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