Oncorhynchus kisutch (coho salmon): 109883197
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Entry
109883197 CDS
T09179
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109883197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109883197
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109883197
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
109883197
NCBI-ProteinID:
XP_031643164
Ensembl:
ENSOKIG00005033722
LinkDB
All DBs
Position
LG13:74332031..74337629
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AA seq
558 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYLGEEGESDGEAGEGQVEGGLEDIPEEMEVDYSGAESV
SSIAKLRNSKQFSEIMDKIAIYVEKQRKNSEVSGPVEADPEYKLIVAANNLTVEIENELN
IIHKFVRDKYSKRFPELESLVPNSLDYVRTVKELGNNLDKCKNNENLQQILTNATIMVVS
VTASTTQGTMLGEDELKRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSVIVGASTA
AKIMGIAGGLTNLSKMPACNLMLLGTQKRTLSGFSSTAVLPHTGYIYHCDVVQTLPPDLR
RKAARLVSAKCTLASRVDSFHESADGKVRTGRGKKGVNKHLLHINSGVILSVQVGYDLKE
EIEKKFDKWQEPPPVKTVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAE
IEDDAYQEDLGFSLGQLGKSGSGRVRQAQVNEATKARISKSLQRKLQKQNMTYGGRSTVG
GRSTVGSRSTVGGRSTVGGRSSVRDNSSGTSSSVAFTPLQGLEIVNPHAAEKKVAEANQK
YFSNMAEFLKVKKEGEGK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgatgagctcctggctgatctggaggaggcgggggatgagggggaggat
gggctgtacctgggggaagagggggagagtgatggggaggcaggggagggacaggtagag
ggaggtttggaggacattccagaggagatggaggtggactacagcggagctgagagtgtc
tcgtccatcgctaaactacgcaacagcaaacagttctcagagatcatggacaaaattgcc
atctatgtcgagaagcagcgcaagaactctgaagtctccggtccggtggaggcagaccca
gaatacaagctcatcgttgctgccaataacctcacagtagaaattgagaacgaactgaac
atcattcacaagtttgtacgtgacaagtattctaagaggttccctgagttggagtccctg
gtgcccaactctctggattacgtccgcactgtcaaggagctggggaacaacctggacaag
tgtaagaacaacgagaatctgcagcagatcctgaccaacgccaccatcatggtggtcagc
gtcacagcctccaccacacaggggacgatgctgggtgaggatgaactgaagaggttggag
gaggcctgtgacatggcgctagagctgaaccaatcaaaacacaggatctatgaatatgtg
gagtccaggatgtcattcattgctcctaatctgtcagtcatcgttggagcctcgaccgca
gccaagatcatgggtattgctgggggcctgaccaacctgtctaagatgccagcctgtaac
ctgatgctactgggaacccagaagaggaccctgtcagggttcagcagcaccgctgtgctc
ccacacaccggctacatctaccactgtgatgtggtccagactctacccccggacctgagg
agaaaggcagcacgcctggtttcagctaagtgcaccctggcatcccgagtggacagcttc
cacgagagtgcagacggcaaggtgagaactggaagagggaagaaaggggtaaataaacat
ctgttacatattaactctggtgttattctctcggtgcaggtgggctacgacctgaaagag
gagatcgagaagaagtttgataaatggcaggagcctccgccggtgaagactgtcaaaccc
ctgccagcaccgttggatggacagaggaagaagagaggagggcggaggtatcgtaagatg
aaggagcgtctgggtctgacagagatcaggaaacatgccaacaggatgaccttcgcagag
attgaggatgatgcgtaccaggaggacctgggtttcagtctgggccagctgggaaagtcg
ggcagcggacgcgtcagacaggctcaggtcaacgaggccaccaaggccaggatatccaag
tccctacagaggaagctgcagaagcagaacatgacatacggcggcaggtccacagttggc
ggcaggtccacagttggcagcaggtccacagttggcgggaggtccacagttggcgggagg
tcctcggtcagagacaactcctcaggaacaagttccagcgtagccttcactccactacag
ggactggagatcgtgaacccgcatgcagcagagaagaaggtggctgaggccaaccagaaa
tacttctccaacatggcagagttcctcaaggtcaagaaggagggagagggaaagtga
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