Oncorhynchus kisutch (coho salmon): 109883257
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Entry
109883257 CDS
T09179
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A-like isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109883257
03036 Chromosome and associated proteins [BR:
oki03036
]
109883257
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109883257
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
109883257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
SLFN-g3_helicase
TcaA_2nd
Motif
Other DBs
NCBI-GeneID:
109883257
NCBI-ProteinID:
XP_031688797
Ensembl:
ENSOKIG00005015781
LinkDB
All DBs
Position
LG10:5772907..5794101
Genome browser
AA seq
514 aa
AA seq
DB search
MDAFEGLHSVRLSFSPPLASVTNPGYEVLVSARSGIQVYSNTTFYGKPSVLEQAQKRGRA
KYHSYREETKEERCEVGRLVDLEPGPIPRVEGGGQGDPRPTRPQEQGTQARDREDSRLER
AAQLEGARGGEHEDNVSRLRSSSLEIREKGSEILREQLDAAQKELKLKDKECERLSQIRD
QLEQELEELTASLFEEAHRMVREANVKQATAEKQLKEAQGKSDVLQAEVSALKTMVLTST
PSSPNRRAHPQLLSPGTRSRGASPHHGGGHARNKSASGALPLAPGGHSDLPSDLQPVRED
KEPTVPVLLLLILCLVPGHSVSVTYEPYWAEQGERPRSLSRQMDSILYAEFLTWKNRPSL
DRSSAFLVRIYREDIGPCLSFTRSELSQSVQSAVENNSLTIEPVAMSALSMVRANAIECG
GPNGLKAAVEMKCALSGISRSCKHQIKLGDEESYYYISPSSRARITAVCNFFTYIRYIQQ
GLVRHDAEQMFWEVTRLRREMTVAKLGFYLTDQE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtttgagggtctccacagtgtccggctgtccttctctccacccctcgcctct
gtcaccaatccagggtatgaggttctagtatcagccagatctggtatccaggtatactcc
aacaccacgttctatggtaaacccagtgttctagagcaggctcagaagagagggagagcc
aaatatcactcctaccgagaggagactaaagaagagaggtgtgaggttggaaggttggta
gacctggagccaggtccaatccccagggtggagggtggagggcagggtgaccccaggccc
accaggccccaggagcagggtacccaggccagggacagagaggacagcaggctggagcgt
gctgcccagctggagggtgcccggggcggggagcatgaagacaatgtgtcccgcctccgg
agctcttccctggagatcagggagaagggatcagagatcctcagagagcagctagatgct
gcacagaaggagctgaagctgaaggataaggagtgtgagcgtctgtcacagatccgggat
caactagagcaggagttggaggagctaactgccagtctgtttgaggaagctcacaggatg
gtgcgtgaagccaacgtgaaacaagcgacagcagagaaacagctgaaggaggctcaggga
aagagtgatgttctgcaggcggaggtgtcagccctgaagaccatggtcctgacctccacc
ccgtcttcccctaaccgccgggcccaccctcagctcctctccccgggcactaggtccagg
ggtgccagcccccaccatggagggggacacgcacgcaacaagagtgccagtggtgccctc
ccattggcccctggtgggcactcagacctgccctctgacctgcaaccagtcagagaggac
aaagagcctactgttcctgtgctcctcttgctgattctatgtctggttccaggtcactct
gtctctgtgacctatgaaccctactgggcagagcagggggagaggccacggtctctcagc
cgccagatggacagcattctgtatgcagagttcttgacctggaaaaacagacctagtctg
gacagaagttcagccttcctggtgcggatatacagggaggacatcggcccctgcctctcc
ttcacacgatctgagttgtctcagtcagtccagagtgcagtggagaacaactctctaacc
atcgagccggtggccatgtcagctttatccatggtcagagccaacgccatagagtgtggc
gggcccaatggcttgaaggcagcagtagagatgaagtgtgcgttgagcggcatatcccgg
tcctgtaagcaccaaatcaaactgggtgacgaagagagttactactatatctcaccctcc
agcagggcacggatcacagccgtgtgtaacttctttacctatatccgctatatccagcag
ggcctggtcagacatgatgcggaacagatgttctgggaggtgacacgtctacggagggag
atgactgtggccaagctgggcttctacctcacagaccaggaatag
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integrated database retrieval system
