Oncorhynchus kisutch (coho salmon): 109883390
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Entry
109883390 CDS
T09179
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109883390
Ion channels [BR:
oki04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
109883390
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_LRWD1
LRR_At5g56370
Sp-CxC
LRR_6
Motif
Other DBs
NCBI-GeneID:
109883390
NCBI-ProteinID:
XP_020331018
Ensembl:
ENSOKIG00005025649
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All DBs
Position
LG3:complement(43247835..43279655)
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AA seq
795 aa
AA seq
DB search
MIPITELRYFVDCQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
VNQTCRRYFNATLSAPLMLEPKGIQYNLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHT
LIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKPMKMNGSMD
KKVSCISEDVEASVPMLQRTKSRLEQGIVDRTETGVLDKKEGEQAKALFEKVKKFRIHVE
EGDIVYRLYIRQTIIKVIKFILIICYTGYYVHNIQFSVDCSVDLEDLTGYSMYRCAHPLA
TLFKILACVYISLVGVYGFICMYTLCWMLRRSLKKYSFESIREESSYSDIPDVKNDFAFM
LHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLDKLRQRITKNSQEKLELHLFML
SGIPDTVFDLIELEVLKLELIPDITIPPIIAQLVNLKEMWLYHTPAKIEAPALAFLRENL
KSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNL
TKLPQVVTDVGVHLQKLSVNNEGTKLMVLNSLKKMVNLTELELIRCDLERIPHSIFSLHN
LQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLNNMERLYLNRNKID
NIPSQLFYCRKLRFLDLSHNNLTYIPADVGYLQNLQYLAVTANRIETLPNELFQCKKLRT
LNLGNNCLTSLPSRFGELTGLIQLELRGNRLECLPVELGECKQLKRTGLVVEEDLFNTLP
TEVKEQLWKVDKETA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatccccatcactgagctgcgttacttcgtagactgtcagcctgcctaccgtatcctg
aagccatggtgggacgtcttcaccgactacatctctatcgtcatgctcatgatcgccgtg
ttcggcggcacgctgcaggtcactcaggacaagatgatctgcctgccctgcaagtgggtg
gtcaaccagacctgcaggaggtatttcaatgccaccctgtcggccccgctgatgttggag
cccaaagggatccaatacaacctggaccgccaccagtacaactacgtagacgccgtctgc
tacgagaaccgcctgcactggttcgccaagtacttcccctacctggtgctactgcacacg
cttatcttcctggcttgcagtaacttctggttcaagttcccccggactagctccaaactg
gagcactttgtgtcaattctcctgaagtgttttgactctccctggaccaccagggctctg
tctgagacggtggtggaggagagcgaccccaagccgatgaagatgaatggctcaatggat
aagaaagtgtcgtgtatcagcgaggatgtggaggctagcgtccccatgctccaaaggaca
aagtctcgcctggagcagggtattgtggatcgcacagagactggcgtcctggataagaaa
gaaggtgaacaggcaaaggccttgtttgaaaaagtgaagaagttccgcatacacgtggaa
gaaggagacattgtgtacaggctttacatccgacagactattatcaaagtcattaagttc
attttgattatctgctatacagggtattatgtgcacaatattcagttcagcgtggactgt
agtgtggatctagaggacctcacggggtatagcatgtatcgttgtgctcatcctctggcc
acgctgtttaagatcctagcttgtgtctacatcagcttagtgggggtttatggattcatt
tgcatgtataccctctgttggatgctgcggcgctcgctgaagaaatactcctttgagtcg
atacgagaggagagcagttacagcgacataccggacgtaaagaacgactttgctttcatg
ctgcacatgatcgaccagtacgatcccctgtactcgaaacgctttgccgtcttcctgtct
gaagtgagcgagaacaagctgcggcagctcaacctgaacaatgagtggactctggacaaa
ctgaggcagaggatcaccaagaactcccaggagaagctagagctgcacctgttcatgctg
agcggcatcccagacaccgtgtttgatctgatagagctggaggtgctgaagctggagctc
atcccagacatcaccatccctcccatcatcgcccagctggtcaacctgaaggagatgtgg
ctataccacaccccggctaagatcgaggctccggccctggccttcctcagggagaacctc
aagtccctccacatcaaattcacagacatcaaggagatccctctgtggatctatagtttg
aagaacctgagcgagctgcacttgacggggaacctgagcgcagagaacaatcgatatatt
gttattgatgggctacgggagctgaagaggctcaaggtcctccggctaaagagcaacttg
accaagctacctcaggtggtgacggatgtgggggtgcacctccagaagctctcagttaac
aacgagggcaccaagctgatggttctcaacagcctgaagaagatggtgaacctgacagaa
ctggagctgatacgttgtgatctggaacgcatcccacactctatcttcagcctgcacaac
ctgcaggagattgacctcaaggacaacaatctgaagactatcgaggagatcatcagcttc
cagcacctgcaccgtctggtctgccttaaactctggtacaaccagattgcctacattccc
atccagatcggcaccctcaacaacatggagaggctctatctgaacaggaacaagattgat
aacatccccagtcagcttttctattgtcgtaagctacgcttcctggacctgagccataac
aacctcacctacatcccagcagatgtgggctacctgcagaacctccagtacctggcagtc
acagccaacagaattgagaccctgcccaatgagctgttccagtgtaagaagctccgtact
ctgaacctggggaataactgcctgacgtctctgccatcacgcttcggggagctgacgggg
ctgatccagctggagctgaggggtaacaggctggaatgtctgcccgtagagctgggggag
tgcaagcagctgaagaggacgggcctggtggtggaggaggacctcttcaacaccctgccc
accgaggtgaaggagcagctgtggaaggtggacaaggagacggcctga
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