Oncorhynchus kisutch (coho salmon): 109883411
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Entry
109883411 CDS
T09179
Name
(RefSeq) Y-box-binding protein 1-like isoform X1
KO
K09276
Y-box-binding protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109883411
03019 Messenger RNA biogenesis [BR:
oki03019
]
109883411
03041 Spliceosome [BR:
oki03041
]
109883411
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
109883411
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109883411
mRNA cycle factors
Common to processing body (P body) and stress granule
109883411
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
General mRNP proteins
109883411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
109883411
NCBI-ProteinID:
XP_020331038
Ensembl:
ENSOKIG00005029799
LinkDB
All DBs
Position
LG24:716048..725954
Genome browser
AA seq
326 aa
AA seq
DB search
MSSEAETQPPEPAVVDAESPSSPAAAAVSAGDKKVIATKVLGTVKWFNVRNGYGFINRND
TKDDVFVHQTAIKKNNPRKYLRSVGDGEIVEFDVVEGEKGAEAANVTGPAGVPVQGSKYA
ADRNRYRRYPRRRGPARDGEYPDNYQSDGEGEGDRPPRKSREGAESAPEGEMQTQQRRPS
FPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDENQGGPDQGNKPMRQNYYRGFRP
RFRPSRGGGPPRPRPVRDGEGENKENQVGDGENQEPRQRRYRRNFNYRRRRPQTGGKPQD
GKEAKADGEPSLEKTSAPAAEQGGAE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaaccgccggagcctgctgtcgtcgacgcggagagccca
tccagcccggcggcagccgccgtttccgcgggggataagaaggtcatcgcaactaaggtc
ttgggtacagtcaaatggttcaacgtcagaaatggctacggtttcatcaacaggaatgac
acaaaagatgacgtctttgtccaccagactgccataaagaaaaacaacccaaggaaatac
cttcgcagtgttggagatggagaaattgtggagtttgatgtggttgaaggggagaaggga
gcagaggcagccaatgtcaccggcccagcgggtgtcccagtccaggggagcaagtatgcc
gctgaccggaaccgctataggcggtacccccgcaggaggggcccagcccgtgacggcgaa
tacccagacaactaccagagcgacggtgagggcgaaggagatcggcccccccgcaagagc
cgtgagggtgccgagagcgccccagagggagagatgcagacccagcagcgcaggccctcc
ttccctggaagacggcgctaccccccatactttgtacgtagacgctatggccgtcggccc
ccgtacaccaacgcacctcgcggagagatgactgagggtggagaaggcgacgagaaccag
ggcggtccagaccagggcaacaaaccaatgaggcagaactactacagaggcttccgacca
aggttcagaccaagcagaggtggtggtccaccccgtcccagaccggtacgggacggcgag
ggggaaaacaaggaaaaccaggttggtgacggcgagaaccaggagccccgccagcgccgc
taccgccgaaatttcaactaccgccgcagacgcccacagaccggtggcaagccccaggat
ggcaaggaggccaaggccgacggcgaaccatcccttgagaaaacgtccgctcccgcagcc
gagcagggcggggctgagtag
DBGET
integrated database retrieval system
