Oncorhynchus kisutch (coho salmon): 109883487
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Entry
109883487 CDS
T09179
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109883487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109883487
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
109883487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
109883487
NCBI-ProteinID:
XP_031692394
Ensembl:
ENSOKIG00005002889
UniProt:
A0A8C7CGI9
LinkDB
All DBs
Position
LG2:complement(911523..941096)
Genome browser
AA seq
942 aa
AA seq
DB search
MTKCKKKKRQDDFQKVKLKVGKTKPKADNATNINFRTKGINLTEQLKKDANAPTTHRKLN
IKDLLSQLHHYSGTVKQGALVGLRELLTLHPSELDQHLSSLLSEAAAVFTDKDPNVRMSA
TRLLRFIAQSVPAERTSPFFPLLSAHLSCAMTHIETGIQEDALKVLDVLLDHYPALLAAR
PALLLTNFLELISHRSTGGGARKGQEGKGRSWALSVNPNRNVTGQQWRLTVLLRLGRFLQ
AVVEERRAEEGVACVSGDMFSVLNGQGGANAPLELNWEELTYRKGGFQVFEHSGAMPTPH
STFKLRPETEPGAGVSEGLGTGEAVRGFASTLVPLLLDVWVEASASDRSKTDSAHLLTPD
AMSLMYQVLSILQLLRKLAPQREYQDTLDVWFRSEYLGDFKQHFMKNFPYGNLDIPKQRR
KTDPKRSKQATTIPGQTVEPLALNVLLCQVMVSMVTLSQREGQAQEPDAEWLMPLRGFVQ
ETLSSGAKLSQRHLHTLLETVWRMVITQRSRAVTEDLLQAVYVQYQQMNLNLQTRTLLLS
FYSRLYLQEHNHTHIARSRVLSRWLAALPLQLSQLGHRNPALSDRLLLSIQAAASRGNKA
LLNSLHTHACRLYDPQEGSVVLLPAESQQRLVQLLYFLPVMSQGLLANLSRCCTAGRVSA
GLAASLIRIIHLRSSLSGWSVGSQDATLRDVDYISFLFSTLTGFSSDELATLQEAGDESV
LPPSPLSPLSLYPTPLEQFTHHWDVVEEVCHCLETLGSRSQCFDVLQNGICKNLTGLAVV
PDSMAAGLLRAVARLLDLSFLPSEPLLRFLSRCCLSLLSLLLTLQQDTASENNHKREAVW
GACVAALSSIPRLLRLVLQSLRVRDLCEEELPQLAQILSLLLQHTALRNHMLANATLLQH
IIQDLTRYCRGESKEQWMTDLLYCYSVTMATHRGNLGLRDIY
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtgcaagaagaagaagaggcaggatgacttccagaaggtcaagctgaaggtg
gggaagaccaagcctaaagcggacaacgccaccaacatcaacttccgcaccaagggaata
aacctaactgaacagctgaagaaagatgctaatgcacccaccacacaccggaagctcaac
atcaaggacctgttgtcccagctgcatcactacagtggtacagtgaaacagggagctctt
gtgggactgagggagctgctgacccttcacccctcagagttagaccaacacctctccagt
ctgctcagcgaggctgctgccgtcttcacagacaaggacccgaatgtacggatgtctgcc
acacgcctgctcaggttcatagcccagagtgtgccagcggagcggacgtctccattcttc
cctctcctctctgcccacctctcctgtgccatgacccacatcgagacgggtatccaggag
gatgccctgaaagtccttgacgttttgctggaccactatcctgccctgctggccgctcgt
cccgccctgctgctcaccaacttcctggagctgatctcacacagaagtaccgggggcggg
gcaaggaaggggcaggaggggaaggggaggagctgggccctgtcagtcaaccctaacagg
aacgtgactggtcagcagtggagactcacagtgctgctcagactggggcgttttcttcag
gcggttgttgaggagaggcgagcggaggagggggttgcatgtgtctcaggtgacatgttc
agtgttttgaatggacaaggaggagctaacgcacctttggagctcaactgggaggagctt
acctacagaaaaggtggatttcaggtgtttgaacattcaggagccatgcccactccgcat
tccaccttcaaactccggccggagactgagcctggggctggggtgagtgaagggctgggc
acaggggaggctgtacggggctttgcctccaccctggtgccccttctactagacgtctgg
gtagaggctagtgccagcgaccggagcaagactgacagtgctcatctcctcacccccgat
gccatgtcactgatgtaccaggtcctctccatactacagctgctacgcaagctggcgcca
cagagagaataccaggatacactggatgtgtggtttcgcagtgagtacctgggggatttt
aagcagcacttcatgaagaacttcccctatggaaatctggacatccctaaacaaaggcgg
aagacagaccccaagaggagtaagcaggcaactacaatcccagggcagacagtggaaccc
ttggctctgaacgtgctgctctgccaggtcatggtttccatggttaccctcagccagagg
gaggggcaagcccaggagcccgatgctgagtggctgatgcctctgagagggtttgtccaa
gagactctgtccagtggggccaagctgagccaaagacacctacatacactcctggagact
gtctggagaatggtcatcacacaacgcagcagggcggtgacggaggatctgttacaggcg
gtgtatgttcagtaccagcagatgaacctgaatctgcagaccagaacactgctactttcc
ttctacagtagactgtacctacaggaacacaaccacacacacatcgccaggagtagagtg
ttgtctcggtggctggctgctctaccgctccagttgtcccagctgggccaccgtaaccct
gccctctcagacaggctcctgctctccatccaggctgctgcctcccgcgggaacaaggcc
ctgctgaactccctacacacgcatgcatgcaggctctacgacccacaggagggcagtgtg
gtattgttaccggctgaatctcagcagcgattggtccagctactctacttcctgcctgtg
atgtcacagggtctattggccaatctgagtcgctgctgcactgcgggacgcgtctctgcc
ggcctggctgcctccctcatacgcatcatacacctcaggtcctctttgagtggctggtca
gtagggtctcaggacgcgaccctgcgtgatgttgactacatcagcttcctgttctccacc
ctcacagggttttcgtctgatgagctggccaccctgcaggaggctggggatgagagcgtg
ctccctccctcccccctctcccccctcagcctctaccccacccccctggagcaattcaca
caccactgggacgtggtggaggaagtgtgccactgcttggagacgctggggtctcgttca
cagtgctttgacgtgctgcagaacggcatctgcaagaacctgactggtctggctgtggta
ccagacagtatggcagcagggttgttgagagcggtggccagactgttggacctgtccttc
ctccccagtgaacctctactgaggttcctgtcccgctgctgcctcagcctactgtctctg
ctactgaccctacagcaggacaccgcctcagagaacaaccacaagagggaggcagtgtgg
ggcgcgtgtgtggcagcgctgagcagcattccccggctgttgcggttggttctgcagtcg
ttgcgagttagggacctgtgtgaggaggagctgcctcagctggcccagatactgtccctg
ctgctgcagcacacagcgctacgcaaccacatgctggcaaacgcaactctactacaacac
attatacaggacctcacgaggtactgtcgaggtgagtccaaggagcagtggatgactgac
ctgctgtactgctacagcgtaaccatggcgactcatcggggaaacctggggctccgagac
atctactga
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