Oncorhynchus kisutch (coho salmon): 109883635 Help Entry 109883635         CDS       T09179                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04140   Autophagy - animal oki04142   Lysosome biogenesis oki04145   Phagocytosis oki04148   Efferocytosis oki05132   Salmonella infection Brite KEGG Orthology (KO) [BR:oki00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     109883635    04142 Lysosome biogenesis     109883635    04140 Autophagy - animal     109883635    04148 Efferocytosis     109883635  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     109883635  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oki04131]     109883635 Membrane trafficking [BR:oki04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     109883635 SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 zf-Vps39_C CNH TPR_Vps41 Clathrin VPS18_solenoid_2nd UN_NPL4 Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_like Motif Other DBs NCBI-GeneID:  109883635 NCBI-ProteinID:  XP_031643445 Ensembl:  ENSOKIG00005005551 LinkDB All DBs Position LG14:3253733..3280969 Genome browser AA seq 707 aa AA seqDB search MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKNNAGTNRFEVTLEKSNK NFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKARGATLFACDLQQSPSGE AQLRMCVAVKKKLQLYYWKDREFHELQGDFSAPDIPKAMAWCQNSICVGFKRDYYLIRVS GAQNRKHCVHVLLQTPTHVIGLYPDLLPADYRKQLHYPNPLPSLSGAELEKAHLALIDYL TQKRSHLVKHLNDSEPSTPSPLMEGIPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLR LDNNHCHIEESEYILKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQ YLQRLGMENLVIIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDKVLNFLKEGFKELTI PYLEHIVHVWEETEPEFHNVLIQLYLERVQGLMKQYLNSLPEGVPAVAAGKEEGDLGEFR NKLLCFLEVSTSYEPGRLISDFPFDGLLEERAVLLGRMGKHEQALFIYVHVLKDTHMAEE YCHRHYDKETDRSQDVYLSLLRMYLSPPDVHCLGPIKMELLEPQTNLMAALHVLELHHSK LNTTKAIDLLPANTQIREIRVFLESVLEEKAQRKRFDQVLKSLLQAEFLRVQEERIFHQQ VKCIITEEKTCRVCKKKIGNSAFARYPNGVVVHYFCCKDRGVCPTEQ NT seq 2124 nt NT seq  +upstreamnt  +downstreamnt atgcatgacgcttacgaaccggtccctatcctggagaaactgcctctgcagattgactgt cttgctgcttgggaggactggcttctggtaggcactaaaccaggccatctcctgctctac aggataaaaaataatgcaggtaccaacaggtttgaggtgactctggagaagtccaacaag aacttctcaaagaagatccagcagctgtttgttgtgtcacagtacaagatcctcgtcagt ctgttagagaacaacatccatgtccatgacctcttgaccttccagcagattactgtggtc tccaaggccagaggggcaacgctcttcgcctgtgacctgcagcagtccccctcgggagaa gcccagctgaggatgtgtgttgctgtgaagaagaagcttcagctgtactactggaaggac agggagttccatgagctacagggggacttttctgctccagacatcccgaaggccatggcc tggtgtcagaactctatctgtgtaggcttcaagagagactactacctcatccgggtcagt ggggctcaaaacaggaaacactgtgttcatgttttactgcagactccgacccatgtgatt ggtctgtatcctgacctgctccccgctgactaccgtaaacagctgcactaccccaacccc ctgcccagtctgtctggagcagaactggagaaggctcacctggcgctcatagactacctg acacagaaacgcagccacctggtgaaacacctgaacgactccgagccgtccaccccgtct cccctcatggagggaattccaaccatcaagagcaggaagaaactcctgcagatcatcgac accacgctgctcaaatgctacctgcataccaacgtggccctggtgtcccctctgttgcgt ctggataataaccactgtcacattgaggagagtgagtacatcctgaagaaggcccacaag tacagcgagctcatcatcctctatgagaagaagggcctgcatcagaaagccctacaggtg ttgttggatcagtccaccaaggctaactctcctctaaagggacatgagaggacggtgcag tacctccagagactggggatggagaatctggtcattatctttgagttctctccctgggtt ctgaagatctgtcctgaggacggactcaagatattcactgaggacctgacggaggtagag accctgcccagagacaaggtcctgaacttcctgaaggagggctttaaggagctgactatc ccctacctggagcacatcgtacacgtctgggaggagacggagccagagttccataacgtc ctcattcagctgtacctggagagggtccaggggctcatgaagcagtacctcaactccctg cccgagggggttcctgcagtggctgctggaaaggaggagggggacctgggagagtttagg aacaagcttctatgtttcctggaggtctctaccagctacgagcctggacgtcttatcagt gacttcccctttgacggtcttctggaggagagggccgtgctgctgggtcggatggggaaa cacgaacaggccctcttcatctacgtacacgtcctgaaggacacccacatggcagaggag tactgtcataggcattatgacaaagagacggacagaagccaggatgtgtacctgtctcta ctgcgcatgtacctgtcccctcctgacgtccactgtcttgggccaatcaaaatggagctg ttggagccacagaccaatctaatggcagctctacatgtcctggagctgcaccacagcaag ctgaatacaactaaggccatcgacctgctgccagccaacactcagatcagagagatccgt gtgttcctggagagtgttctggaggagaaggctcagaggaaacgctttgaccaggtgctc aagagtctgctgcaggccgagttcctacgggtccaggaggaacgtatcttccaccaacag gtgaagtgtatcatcacagaggaaaagacctgcagggtctgtaagaagaagatcggaaac agcgccttcgccaggtatcccaacggtgttgtggttcattacttctgctgtaaggaccga ggggtgtgtcctacggagcagtga

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