Oncorhynchus kisutch (coho salmon): 109883649
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Entry
109883649 CDS
T09179
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109883649
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
109883649
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
109883649
NCBI-ProteinID:
XP_031659169
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All DBs
Position
LG23:22202885..22208626
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AA seq
1208 aa
AA seq
DB search
MSYHPVDTIGSPFRRSMDSRTTYGRSTGTPSSGFRSQSWSRASPGSTMTSSYKRSVNMPV
ARAYSSTLLSSADSVDFNQTNGDYKRSNEKEQLQGLNDRFAGYIDKVHYLEQQNSQIEEE
IQTLRQKQVSQSQLGDLYDQELQELRSMLEQIHHDKAQIQLDTDHVEDDIQRIRDRFDEE
ARIRDETEGIIRALKKDMTDSDLVKSEFEKKVQSLHDEIAFIRNNHEEEVSDLFAQVQAS
QVTMERKDIQKTDITEALREIRTQLEGHSNQNLQQVEDWFMCRYSKLTDAAAQNKDAIKS
ARDEIADYRRQLQSKTVELESVRGTRESLERQLNDIEDRHNNDLSSLQETIHQLDNELKG
TKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRHTVTSSKKSKYEPP
KLKVQHKFVEEIIEEIRVEDEKDEMDQALAEMAQEFSATLEAEATDEGEDEGEEGGEEAE
GEGGEGESEEVVASTEAQVSSSTPAEEEEEDKEGEEEGGEKEEEGEKGEEGEGEKGDDTE
GGDEGEGEGELEETVLCSKAPESKASPDKEKAGEKEGRGGEEETGEGEGEEEGDDQDEDA
GSDKGSKDGDDKDEEDEKKGKDEKEDNIDEKAAVAKIEAPKTEAPKSEAPKVEVQKSEAP
KPSKPDSLKAESPKAGSPKSESPKAGSPKHESPKAVTPKSESPKPGSPKSESPKPAGSPK
LESPKPAGSPKSESPKPSGSPISESPKHAGSPKSESPKLAGSPNSESPKPAGSPTSESPK
PAGSPKSAGSPKSESPKPAGSPKSESPKPAGSPKSESPKPAGSPKSESPKPAGSPKSESP
KLAGSPKSESPKPAGSPTSESPKSPGSPKSESPKPAGSPTSESPKPAGSPKSESPKLAGS
PKSESPKPAGSPTSECPKPAGSPKSAGSPKSESPKLTGSPTSESPKPAGSPKSLSPKPSG
SPKSGSPKPSGSPKSESPKPAGSPTSESPKSAGSPKSESPKPAGSPKSESPKLAGSPKSE
SPKPAGSPKSESPKPAGSPKLESPKLGSPEAETPKGEAPKPEAPMSEAPKAAEEKVDKKS
DSEEERKVEKKDAAMNGDVEKITPEDKDKKDEGGKEAEEKDVISNGVDESPTKDDPDQKD
DPKDQKVVITKTVETITTGEDGAKHVTKSVTVTETVKESEDVMQEKTVSSKKMEKHSSQS
VKVVTETE
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccacccggtggacacgataggaagtccattcagaagaagtatggatagtagg
accacctacggccgctccactggcaccccctccagcgggttccgttctcagtcctggtcc
cgggcaagcccaggctccacgatgacctcctcctacaagaggagcgtcaatatgccggta
gccagagcgtacagctccacactcctcagctccgccgacagcgttgatttcaatcaaacg
aacggagactacaagcgctccaacgagaaagagcagctccaggggctcaacgaccgcttc
gccggttacatcgacaaggtgcactacctggagcagcagaacagccagatcgaagaggag
atccagacgctgcggcagaagcaggtgtcgcaatcccagctaggcgatttatacgaccag
gaactccaggagctgcgctccatgctggagcagattcaccacgataaagcgcagatccag
ctcgacacggaccacgtcgaggatgacatccagagaattagggaccgcttcgatgaggaa
gcccgcatcagggatgagacggaaggcatcatccgggcgttgaaaaaagatatgaccgac
tctgatttggtgaagtcagagtttgagaagaaagttcagtcactgcatgacgagattgcc
tttatccgcaacaaccacgaagaagaggtgagcgacctgttcgcccaggtgcaggcgtcg
caggtgaccatggagaggaaagacatccagaagacggacatcaccgaggcgctccgggag
atccgcacccagctcgagggccactccaaccagaacctgcagcaggtggaggactggttc
atgtgccgctattccaagctcactgatgctgcggcacaaaacaaagatgcaatcaagtcc
gcccgtgatgagatagcagactaccgtcgccagcttcagtccaagaccgtggagttagag
tccgtccgtggaaccagggagtcactggagaggcagttgaatgacatcgaggaccgacac
aacaacgacctgtccagcctgcaggagaccatccaccagctggataatgagctcaagggc
acgaagtgggagatggcgcgtcatctgcgtgagtaccaggacctgctcaatgtgaagatg
gccctcgacattgagattgctgcatacaggaaactcctagaaggtgaagagacccacttt
agcactttcccctaccgccacaccgtcacctcctctaagaagtccaagtatgagcctccc
aaattgaaagtccagcataagtttgtagaggagatcatcgaggagatcagggtagaggat
gagaaggatgagatggaccaggccctggctgagatggcccaggagttttctgccactctg
gaggcagaggcaacagatgaaggagaggatgagggagaagagggaggagaagaagcagag
ggagaagggggagagggtgaatcagaagaggttgtagcctccactgaagcccaagttagc
tcgagcacacctgctgaggaggaagaggaggacaaagaaggtgaagaggaagggggagaa
aaagaagaagagggtgagaaaggagaagagggtgagggtgagaagggagatgatacagaa
ggtggtgatgagggagaaggagagggggaattagaggagacagtcctgtgctctaaagcc
ccagaatcaaaggcctctcctgacaaagagaaggctggagagaaggagggaagaggagga
gaagaggagacaggagagggagagggagaagaggagggtgatgatcaagatgaagatgca
ggtagtgacaaaggatccaaagatggagatgataaggatgaggaagatgagaagaaagga
aaggatgagaaagaagacaacatagatgagaaggcagctgtagccaagatagaggctccc
aaaacagaagcccccaagagtgaggccccaaaagttgaggtccagaaatctgaggcccca
aagccctccaagccagactccctaaaagctgaatccccaaaggctgggtcccccaagtct
gagtcaccaaaagctggatcccccaaacatgaatctcctaaagctgtaacccccaaatct
gaatctccaaaacctggctcccccaaatctgaatccccaaaacctgctggatcccccaaa
ttggaatccccaaaacctgctggatcccccaaatctgaatccccaaaaccttctggatcc
cctatatctgaatctccaaaacatgctggatcccctaaatctgaatccccaaaacttgct
ggatcccctaattctgaatccccaaagcctgctggatcccctacttctgaatccccaaaa
cctgctggatcccctaaatctgctggctcccccaaatctgaatccccaaaacctgctgga
tcccccaaatctgaatccccaaaacctgctggatcccccaaatctgaatccccaaaacct
gctggatcccccaaatctgaatccccaaaacctgctggatcccccaaatctgaatcccca
aaacttgctggatcccctaaatctgaatccccaaaacctgctggatcccctacttctgaa
tcccccaaatctcctggatcccctaaatctgaatccccaaaacctgctggatcccctact
tctgaatccccaaaacctgctggatcccctaaatctgaatccccaaaacttgctggatcc
cctaaatctgaatccccaaaacctgctggatcccccacttctgaatgcccaaaacctgct
ggatcccctaaatctgctggatcccccaaatctgaatccccaaaacttactggatccccc
acatctgaatcccccaaacctgctggatcccccaaatctttatcaccaaaaccttctgga
tcccccaaatctggatccccaaaaccttctggatcccctaaatctgaatccccaaaacct
gctggatcccctacttctgaatcccccaaatctgctggatcccctaaatctgaatcccca
aaacctgctggatccccaaaatctgaatccccaaaacttgctggatcccctaaatctgaa
tccccaaaacctgctggatcgcctaaatctgaatccccaaaacctgctggctcccccaaa
ttggaatcccccaaattaggatcccccgaggcagagacccctaagggtgaggccccaaaa
ccagaagctccaatgtcagaggcccccaaggctgcagaagagaaagtagacaaaaagagt
gattcagaggaagagaggaaggtagaaaagaaagatgcagccatgaacggagatgtggag
aagattaccccagaggacaaggacaagaaggatgagggtgggaaagaggcagaggagaag
gatgttatctcaaatggagtggacgagagccccactaaagatgacccggaccagaaagat
gatccaaaggaccagaaggtggtcatcaccaaaacggtggagaccatcaccactggagag
gacggggccaagcatgtcaccaaatcggtcactgtcaccgagactgtgaaggagtctgag
gatgtgatgcaggagaagacagtctccagcaagaagatggagaaacactcttcccagtcc
gtcaaggtggtgactgaaactgagtaa
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