Oncorhynchus kisutch (coho salmon): 109883688
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Entry
109883688 CDS
T09179
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109883688 (tmc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109883688 (tmc3)
03037 Cilium and associated proteins [BR:
oki03037
]
109883688 (tmc3)
Transporters [BR:
oki02000
]
Other transporters
Pores ion channels [TC:
1
]
109883688 (tmc3)
Cilium and associated proteins [BR:
oki03037
]
Other cilia and associated proteins
Stereociliary proteins
109883688 (tmc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF6221
Motif
Other DBs
NCBI-GeneID:
109883688
NCBI-ProteinID:
XP_031668257
LinkDB
All DBs
Position
Unknown
AA seq
1481 aa
AA seq
DB search
MSGVSETAVVSRPSTTVKRHKSVRKNSRRIYSSYQDNQPGQSDEEGKEDEHADSNDPEQM
FQNIQFQKEIIANIRTRAWPMRRKLKALKQAREIVLKYEGRLTRTRGYQAAGADLLKKVS
RLLYNIVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTVMTGAFIVIPELLA
GEPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGPVRKLGSAGYRLPLAY
FLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKGA
AIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLELE
KPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSL
IIALLDKVNSMSMASAAAAAAASVVSGNLSDSTAFMATISQPGETSLSTLVSDISISENH
NSTIATIAMVLDVNTSISTSKVTMATMYNHTVMFEQNKQKKPDECWETYVGQEMLKLSII
DMIFTVASILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWYV
TFYWIFLISLRILANILVLLSLAGSIYIIYFVVDRSQKLELEKPELTLWEKNEVSVVVSL
ITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSLIIALLDKVNSMSMASAAA
AAAASVVSGNLSDSTAFMATISQPGETSLSTLVSDISISENHNSTIATIAMVLDVNTSIS
TSKVTMATMYNHTVMFEQNKQKKPDECWETYVGQEMLKLSIIDMIFTVASILLIDFIRGL
VVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGSFFSPCLPAFNVLKLIGL
MYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSQHCGPFS
GQEKIYDIISETIANDFPLWFSKVMSYVTSPVVALPALLLLFMLIYYLQAIARSLKFTNN
QLRMQLQTKCICQERTEDKKKVLQLASARLQAPEVPGGDRKPDQQDGDITSRESSIRTPS
PRPNGSVTNFQSPDRRGNGIRTITQSASRVKTARATFAAGAPRSPTVSILHKQRPEIIPN
RHPSYLGGPSGTCRSKSYHHVAYNPPTRYSSENIHSDPLYRKTIRPLHSAEAAGIVTAQS
YVGRRPYTTRYVIVNEHEARKKLLRSATRVPRHFRAEDPGGEIVELIPRNTKRYTPRAPH
LHGHPHRSNPPQSHLSDEEEEEEAGGKRESRRGSFGQTHRPRSLSDLQQPARFYIGERLE
TKLSMASKDSHTARGRYGGEAQKGDWEDMETRLHSLSQTSIRGAELPPPVRHTQSPARHP
HSPSRLVHSPPQGPGRRLEPQVKPKTSRSKLEPSLTESDSASLASSSDQQNSSTDQYIQV
IHNKEKYLKSEARQGKLAKKKSKASIDLNVSGSKDLVCSNV
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgtgtctgagactgctgtggtcagtagaccctcgactaccgtgaagcgacac
aagagtgtcaggaagaactccaggcggatttactcatcttatcaagacaaccagccaggc
caatcagatgaggagggcaaggaggatgagcatgcggacagcaacgacccagagcagatg
ttccagaacatccagtttcagaaggagatcatcgccaacatacgcacccgagcctggcct
atgagacgcaagctcaaagccctcaagcaggccagagagattgtcctgaagtacgagggg
aggctaacaaggaccagagggtaccaggctgctggggctgatctgctgaagaaggtctcc
aggttgctgtacaacatcgtggttctgtttattccctgggagatgaggatcaagaaaata
gaaagtcactttgggtcaggggtggcctcctacttcatcttcctcagatggctgtttggt
atcaacatagtccttactgtcatgactggagcattcatagtcatacctgagctcctggcc
ggagagccgttcggaacaacccggagtaagaccattcccaaggagcacctggcctcagcc
caagatctggacaccatctggtctcttgggggctacctccagtactcagtgttgttctat
gggtactatggcccggtgaggaagctcggcagtgccggctatcgcctccccctggcctat
tttctggttgggatggctgtttttgcctacagtttcatcattctgttaagaaagatggct
aagaactcccgtctgagcctagcgagtgcctctgatgagaacttcaccttctgctggaga
gtgttctgtgcctgggactacctcatagggaaccctgaggctgcagagagcaagggagcc
gctatcgtcaacaacatcagggaggccattgttgaggagcaggagaaaaagaaggatact
agtctagcagtcctgatcagtctgcgtatcctagccaacatcctggtccttctctctctg
gctggcagcatttatataatctactttgtggtggaccgctcccagaaactagagctggag
aagccagagctaacactatgggagaagaatgaggtgagtgtggtggtgtccctcatcacc
atgatcgccccgtctgcctttgagctggtggctcagctggagatgtaccatcccaggacc
tccctccgcttccagctggccagagtcctggtgttgtatctgggaaacctgtacagcctc
atcattgcccttctggacaaggtcaacagtatgagtatggcgtcagctgctgcagctgcg
gcggcctctgtggtttcggggaacttgtctgactccacggcattcatggcgaccatctcc
cagccgggggagacgagcctctccaccctcgtatccgacatctccatctctgaaaaccac
aacagcaccatagcgaccattgccatggtgctggatgtcaacaccagcatcagcaccagc
aaggtcaccatggcaaccatgtacaaccacactgtgatgtttgagcagaacaagcagaag
aaaccagacgagtgctgggagacctacgttggacaggagatgttgaagctgtctatcatc
gatatgatcttcacggtggccagtatcctgttgatagacttcatcagagggctggtggtc
aggtacctgagtgactgctgctgctgggacctggagagcaagtttcctgagtatggggaa
ttcaagatagctgagaatgtactccacctgatatataaccaaggaatgatctggtatgtc
acattctactggattttcctgatcagtctgcgtatcctagccaacatcctggtccttctc
tctctggctggcagcatttatataatctattttgtggtggaccgctcccagaaactagag
ctggagaagccagagctaacactatgggagaagaatgaggtgagtgtggtggtgtccctc
atcaccatgatcgccccgtctgcctttgagctggtggctcagctggagatgtaccatccc
aggacctccctccgcttccagctggccagagtcctggtgttgtatctgggaaacctgtac
agcctcatcattgcccttctggacaaggtcaacagtatgagtatggcgtcagctgctgca
gctgcggcggcctctgtggtttcggggaacttgtctgactccacggcattcatggcgacc
atctcccagccgggggagacgagcctctccaccctcgtatccgacatctccatctctgaa
aaccacaacagcaccatagcgaccattgccatggtgctggatgtcaacaccagcatcagc
accagcaaggtcaccatggcaaccatgtacaaccacactgtgatgtttgagcagaacaag
cagaagaaaccagacgagtgctgggagacctacgttggacaggagatgttgaagctgtct
atcatcgatatgatcttcacggtggccagtatcctgttgatagacttcatcagagggctg
gtggtcaggtacctgagtgactgctgctgctgggacctggagagcaagtttcctgagtat
ggggaattcaagatagctgagaatgtactccacctgatatataaccaaggaatgatctgg
atgggttcattcttctctccctgtctgcctgcctttaacgtgttgaagctgataggcttg
atgtacctgaggagttgggctgtgctcacctgtaacgtccctcaccaacaggtgttcaga
gcatccagatcaaataatttctacctggctatgctgttgttcatgctttttctgtgtatg
ctgcccaccatcttcgccatagtgagatacagaccttcccaacactgcgggccatttagt
ggtcaggagaagatttatgacatcatctcagagacgatagccaatgacttcccgctgtgg
ttcagtaaagtgatgagttacgtcaccagccctgtcgtagcgttgcccgctctgctgctg
ctgttcatgttgatctactaccttcaggccattgccagatcccttaaatttaccaacaac
cagctgaggatgcagcttcagactaaatgtatttgtcaggagagaacagaagacaagaag
aaggtattacagctggcttcagcgaggctacaggccccagaggtccccgggggggacagg
aagcctgaccagcaggatggtgacatcaccagccgcgagtcgtccattcgcacgccgtcg
ccacgacccaacggcagtgtcacaaacttccagtcgcccgatcgtcgtggcaacggcatc
cgcaccatcacccagtcagcatcgagagtcaagaccgctagggcgacatttgctgctggg
gcgcctagaagtccaacagtgtccatacttcacaagcaaaggccggagataatccctaac
agacacccttcctacctggggggccctagcggtacctgcaggtccaagtcctaccatcat
gtggcgtacaaccccccgacacgctactcctcagagaacatccactccgacccactctac
aggaagaccatcaggcccttgcactccgcagaggcagctgggatagtgaccgcccagagc
tacgtgggccgtcgcccctacaccacgcgctacgtcatcgtcaacgagcacgaagctaga
aaaaagttgcttcgatcagccacacgcgtccctcgccacttccgagcggaggacccgggg
ggtgaaatcgtagagctgatcccgcggaataccaagcggtatactccaagggctccgcat
ctgcatgggcacccacacaggtcgaatccgccgcagtcacacctgagtgatgaagaggag
gaggaagaggcaggggggaagagggagtctaggagggggtcgttcgggcagactcaccgg
ccgcgctcactctccgacctccaacagccagctcgcttctacatcggagagcgcctggag
accaagctgtctatggcgtcaaaagacagccacactgctagggggcgctacggcggtgaa
gcccaaaaaggggactgggaggatatggagacgcgcttgcactccctctcccagaccagc
atcagaggagcggagcttccaccaccagtcaggcacacacagtccccagccagacacccc
cactcccccagcagacttgtacactcacccccccagggccctggaagacgcctggagccc
caggtcaagcccaagacatccaggtccaagctggagccttccctgactgagtcggactcg
gcctctctggcctccagtagcgaccagcagaacagcagcacagaccagtacatccaggtc
attcacaacaaggagaagtatctcaagtctgaggcaaggcaaggcaaactggctaagaag
aagtccaaagccagtatagatctcaacgtgtctgggtccaaagacctggtctgctccaac
gtgtag
DBGET
integrated database retrieval system
