Oncorhynchus kisutch (coho salmon): 109883792
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Entry
109883792 CDS
T09179
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109883792
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
109883792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
109883792
NCBI-ProteinID:
XP_031653716
Ensembl:
ENSOKIG00005016941
LinkDB
All DBs
Position
LG19:63379712..63395625
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AA seq
630 aa
AA seq
DB search
MERKRGRNVRNKWRCQILRNELKRELRKSQTHFTHNVVGDDGVTVAAEGMSSWKKNKTRN
DRETEEGMDSGLSASAVNVSDVRVPVEAIKSKKKLKNRQTKLEEGAESRETVLRLADDPE
IIELYTEGVEGGENVVTKVQNNEKENRKRKKEKVGAIQLSVCPDKTELPGILEQTGRKWK
PTTRLKTQPDGGAEEGSRRNKRQCCRESDTGMDSVPSKSDNRTPDAGLESETGQDGLHTT
MVETSTQHRRRIQNDKALSENEWRAMIELKEFVPNIASRPVNKIRAMIRYDLDRFKEFRR
QGISLRTGRYSAQENRQLMSNINDFLALTGIENAAKLFHTKRFRDELCFIQRLKSHHRFP
ARIGEGIPRPWHKIYTRGGRKMFDGGSYKGRRRFSEDELYSLKKLQKLHGNNWVKISQLT
GRSETPLMKRFSQIFANLGPWGEEELKRLMEAVRDHLLGQVEPGRGHATVRKDQLYNNIP
WTVVCRRVKTRHRDQCRMKWLGVMAYKMAHGQPAFSGGVKTLKAKVDLIKALNAMQVDDA
SDVDWEEIAHTIGGVTPYYVQMNYHKLKVAKVPLRQSMSFCETIDFLYSSVLPKFEELLR
HSQTESGETESREDPQEHFLLSEIFEDEDD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaagagaggaagaaatgtaagaaacaaatggaggtgccagatcctgaggaac
gaactgaagagagaacttagaaaaagtcaaacacacttcacacataacgtggtgggagac
gatggagtgactgttgccgcggaggggatgagtagctggaagaaaaataaaacccgtaat
gacagagagacagaagaggggatggacagtggcctctcagcgtctgcagtaaatgtctca
gatgtaagggtgcccgtagaggccataaagagtaagaagaagctcaagaacagacaaacg
aagcttgaagagggagcggaaagccgtgagacggttttaagattagcagatgatcctgaa
atcatagaactatacactgaaggggttgagggaggggaaaatgtggtaacgaaggtacag
aataacgaaaaagagaacaggaaacgaaagaaggaaaaagttggagcgattcaactgagc
gtttgtccagataaaaccgagctcccaggtattctagaacaaactgggagaaaatggaaa
ccaacaacgaggctgaaaacacaaccggatggaggggctgaagagggcagcaggagaaac
aagagacaatgctgcagagagtccgacacgggaatggacagtgtcccctctaagtcagat
aacaggactcctgatgctggactagagtctgagacagggcaagatggcctccatacaacc
atggttgagacgagcacccaacaccgcagacgcatccaaaacgataaagctctaagtgaa
aacgaatggagggctatgattgagctcaaagagtttgttcccaatattgcgtctcggcct
gttaataagatcagagcgatgatcaggtatgatcttgatcgattcaaggaattccgaaga
caaggcatttccctgcgaactggacgatacagcgcacaggagaacagacaactcatgagt
aacataaacgacttcctggctctcacagggattgagaatgccgctaaactcttccataca
aagcgcttcagagacgaactgtgttttatccagaggctgaagagtcatcacagattccct
gcgagaataggtgaaggaatcccgaggccttggcataagatctatactcgtggtgggagg
aaaatgtttgatggcggcagttacaagggccgacgaaggttcagcgaagatgaactttac
tctttgaaaaaactgcagaagttgcacggcaacaattgggtgaagatctcacagttgact
ggccggagtgaaacgccccttatgaaacgtttttctcagattttcgcaaacttaggtcct
tggggcgaggaagaactgaagagactaatggaagctgtgcgagaccacctgctgggacag
gtagagcctggcagagggcacgccaccgtcaggaaagaccagctgtacaacaacatcccc
tggacagttgtatgccggagggttaagacacgccaccgggaccagtgtcgaatgaaatgg
ttgggtgttatggcatacaaaatggcacacggacaaccagcattcagtggaggtgtgaaa
accttaaaggctaaagtggatttgatcaaagcgttgaatgcaatgcaggtggacgatgcc
tcagatgttgactgggaagaaattgctcacacaattgggggagttactccttactacgta
cagatgaactaccacaagctaaaagtagccaaagtgccattgcgtcagagcatgtctttc
tgtgagaccattgatttcctgtacagtagtgttctgcccaagtttgaagagctcctccga
cacagtcagaccgagtcaggagagaccgagtccagagaagatccacaagagcacttcctg
ctctcagagatctttgaagatgaggacgactga
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