Oncorhynchus kisutch (coho salmon): 109883828
Help
Entry
109883828 CDS
T09179
Symbol
mars1
Name
(RefSeq) LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00450
Selenocompound metabolism
oki00970
Aminoacyl-tRNA biosynthesis
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
109883828 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109883828 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oki01007
]
109883828 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oki03016
]
109883828 (mars1)
Enzymes [BR:
oki01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
109883828 (mars1)
Amino acid related enzymes [BR:
oki01007
]
Aminoacyl-tRNA synthetase
Class I (U)
109883828 (mars1)
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
109883828 (mars1)
Prokaryotic type
Other AARSs
109883828 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
GST_N_5
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
GST_N_3
GST_C_3
Tom37
GST_N_4
DZR_2
Motif
Other DBs
NCBI-GeneID:
109883828
NCBI-ProteinID:
XP_031680876
LinkDB
All DBs
Position
LG1:complement(9623433..9694127)
Genome browser
AA seq
1099 aa
AA seq
DB search
MKLFVSDGNPHCVKVLAVLEFTGVKCDVKHVNHEERVVPYLSRPALPALLLPSGTHLFSP
NSICQYLIGQESSDLVNQWLEWEATELQPAVMQALHMVVLQGKGAETTRVLRGPLSYLDQ
SLSQRTTPFLTAEMVSVADVVLWAALYPILSDSSLVSGNQTLQLWFERVGMLASCVSAAQ
TVLQGKGLKAESLKTYLQRQPTTHHGQGQVQGRGTQPCNSPEGGDDDDCVLSEEEIQSAA
VTWGKGLTDLPMVPERQHPILPQEGKRNVLVTSALPYVNNVPHLGNIIGCVLSADVFARY
GRLRGWNVLYVCGTDEYGTATENKAREEGLTAQQICDKYHAVHASIYQWFQVDFDFFGRT
TTKKQTEIAQNIFWRLHERGFLLEDIVEQLRCEACQRFLADRFVEGTCPFCSYPEARGDQ
CDKCGKLINAVELREPTCKVCSQTPVVQSSKHLFLDLPKLEAELEQWLERSTGSGDWTAN
AKQITRSWVRDGLKPRCITRDLKWGTPVPHPDFSDKVFYVWFDAPIGYLSITANYTDQWE
KWWKNPQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKS
RGVGVFGDMAKDTGIPSDVWRFYLLYLRPEGQDSAFSWVDMATKNNSELLNNLGNFINRA
GMFVSKFFESCVPAMALQQEDKRLLAQVGWELKQYINLMDRVKIRDALKCILNISRHGNQ
YIQVNEPWKKIKGDETDRQRSGTVTGVSVNVACLLSVMLQPYMPTVSQTIRRQLNAPPSV
TGTLLQGTGNFVCSLPAGHHIGTVSPLFQKLESEQIESLKKRFGGQQPEEEEEAKLKPKT
RAQPDVNAQPATTPASGPAAQTAVNGIDAERARELTLAVAEQGEKVRTLKGQKAEKTVIG
AEVTKLLELKKQLSLAEGKDPEPVLTKGKKNAQPATTPASGPAAQTTVNGIDTERARQLT
LAVAEQGEKVRTLKGQKAEKTVIGAEVTKLLELKKQLSLAEGKDPEPVLTKGKKNAQPAT
TPASGPAAQTTVNGADAERARQLTLAVAEQGEKVRTLKGQKAEKTVIGAEVTKLLELKKQ
LSLAEGKDPEPVLTKGKKK
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaaactattcgtgagtgacggaaatccgcactgtgttaaagtgctagcagtgctcgaa
tttacgggagtcaaatgtgacgttaaacatgtcaaccacgaagagagagtggtgccctat
ctcagccgtccagccctgcctgctctgctcctccctagtggaacacacctcttcagcccc
aactccatctgccagtacctgattggacaggaatccagtgatctcgtcaaccagtggctg
gaatgggaagctacagaacttcagcctgcagtgatgcaggcccttcacatggtggtgctg
cagggaaaaggagcagaaaccaccagggttctacggggacctctcagctacctggaccag
agtctgagccagaggaccacaccgttcctcactgctgagatggtttctgtggcagatgtg
gttctgtgggcagctctctaccctatcctgtctgacagcagtctggtatcaggtaatcag
acgctgcagctctggtttgagcgtgtgggcatgttggcatcctgtgtgtctgcagcccag
actgtacttcaggggaagggactgaaggcggagtctctgaagacctacctgcagagacag
ccaaccacacaccatggtcagggacaggttcagggtagaggcacacagccatgcaacagc
cctgagggtggtgatgatgatgattgtgtgctgtcagaggaagagatccagtctgctgcg
gtcacctggggtaaaggacttacagacttacccatggttccagaaagacaacaccctatt
cttcctcaggagggcaagaggaacgtcctagtgaccagtgccttgccgtatgttaacaac
gtccctcatctgggcaacatcatcggctgtgtgctcagcgctgacgtctttgccaggtat
ggtcgtctgcgtggttggaatgtactgtatgtgtgtgggactgatgagtacggtacagct
acagagaacaaggcccgtgaggaaggtctgacagcgcagcagatctgtgacaagtaccat
gctgtccacgcctccatctaccagtggttccaggtggacttcgacttctttggccgcacc
accacaaagaaacagactgagatagcccagaacatcttctggcgtctccatgagcgaggc
ttcctacttgaagacattgtggagcagctgcgctgcgaggcgtgccagcgttttctagcc
gaccgcttcgtcgagggaacatgtcccttctgctcttacccagaggcccgaggggaccag
tgtgacaagtgtggcaagcttatcaacgctgtggagctacgggagcctacttgtaaggtg
tgtagtcagactcctgtagtccaatcctccaaacacctgttcctggacctgcccaagttg
gaggctgagttggagcagtggttggagaggtctactgggtcaggggactggacggccaac
gccaaacagatcaccagatcctgggtgagggacggactcaaaccccgctgcatcaccaga
gacctgaagtggggaacccctgtacctcaccccgacttctctgacaaggtgttctacgtg
tggtttgacgctcctattggttacctgtccatcacagccaactacactgaccaatgggag
aagtggtggaagaacccacagcaggtggagctgtataacttcatggccaaggacaatgtt
ccgttccacagtgtggtgttcccctgctctctactgggagcacaggacaactatacactg
gtcaaccacctggtggctacagagtacctgaactacgaggacaccaagttctctaagagt
cgaggtgttggtgtgtttggtgacatggccaaggatacgggcatcccctctgacgtgtgg
cgattctacctgctgtacctccgtcccgagggacaggactcggccttctcctgggtcgac
atggccaccaagaacaactctgagctgctcaataacctgggcaacttcatcaacagggct
ggtatgtttgtcagtaagttctttgagagctgtgtccctgccatggctcttcagcaggag
gacaagagactgttggctcaggtgggatgggagctgaagcagtacattaacctcatggac
agagtcaagatccgtgatgccctgaagtgtatcctcaacatctctcgccacggtaaccag
tacatccaggtcaacgaaccctggaagaaaattaaaggagatgaaacagacaggcagcga
tcgggtacagtgacaggtgtgtctgtgaatgtggcgtgcctgctgtccgtcatgctccag
ccctacatgccaacggtcagtcagaccatccgcaggcagctgaacgctccgccctccgtt
accgggaccctgctgcagggcacagggaacttcgtctgctctctgcccgccgggcatcac
attggcacggtcagcccgttgttccagaaactagagtccgaacagattgagtctctgaag
aagaggtttggaggacagcagccagaggaggaagaagaagccaaactgaagccaaagacg
agagcccagcctgatgtcaacgcccagcctgccacaaccccagcttcaggtccagctgct
cagactgcagtgaacggcatagacgctgagagagccagggagttaacactagctgtggca
gaacagggggagaaggtccggaccctgaagggccagaaggcagagaaaactgtgattgga
gcagaggtcaccaaactactggaactgaagaaacagctgtccctggctgagggaaaggac
ccagaaccagtgctgacaaaaggcaagaagaacgcccagcctgccacaaccccagcttca
ggtccggctgctcagactacagtgaacggcatagacactgagagagccaggcagttaaca
ctggctgtggcagaacagggggagaaggtccggaccctgaagggccagaaggcagagaaa
actgtgattggagcagaggtcaccaaactactggaactgaagaaacagctgtccctggct
gagggaaaggacccagaaccagtgctgacaaaaggcaagaagaacgcccagcctgccaca
accccagcttcaggtccagctgctcagactacagtgaacggcgcagacgctgagagagcc
aggcagttaacactggctgtggcagaacagggggagaaggtccggaccctgaagggccag
aaggcagagaaaactgtgattggagcagaggtcaccaaactactggaactgaagaaacag
ctgtccctggctgagggaaaggacccagaaccagtgctgacaaaagggaagaagaagtga
DBGET
integrated database retrieval system
