Oncorhynchus kisutch (coho salmon): 109883872
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Entry
109883872 CDS
T09179
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109883872 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109883872 (exosc8)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109883872 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109883872
NCBI-ProteinID:
XP_031664597
Ensembl:
ENSOKIG00005048570
LinkDB
All DBs
Position
LG29:39259215..39270768
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AA seq
239 aa
AA seq
DB search
PGSISTADGSALVKIGNTTVMCGIKGELTSPAVDAPNKGYIVPNVDLPPLCSSRFRPGPP
GEQAQAASQFIADVIESSAVVQKEDLCIVKGKLCWVLYCDIMCLDYDGNLLDACLIALLA
ALKNARLPEVTVNKETEVPEVTLENRRGLNIHKHPVGASFIVFDDSIMIVDPTAEEESLS
TATITVVTDEEERLCALHKPGGTSLSGEKLQDCISRATTRHREVRKLIDKVTQSDKTPK
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
ccaggttctatatccacagcagacggctcagccctggtgaagattggaaacaccacagtc
atgtgtggcatcaaaggggaactgacaagcccagcagtagatgcacctaataaaggctac
attgtacccaatgtagacctgccgcctctgtgttcgtctcggttccgtcctggacctcca
ggagaacaggctcaggccgccagccagttcatcgctgatgtcatagagagctctgccgtc
gtccagaaagaggacttatgcattgtgaaaggaaagctgtgttgggtcctgtactgtgac
atcatgtgtctggactatgacggcaacttgttggacgcctgtctcatcgccctgctggct
gctcttaagaacgcgcgtctcccagaggtgacagtcaacaaagagaccgaggttcctgag
gtgaccctggagaacaggagaggtctgaacatccacaaacaccctgtaggggcctctttc
attgtgtttgatgactctataatgattgtcgaccccaccgctgaggaagagagcctgtct
acggccactatcacagtggtaacggacgaggaagagcgactctgtgccctccacaagcca
ggtggtacgtcattatcaggtgagaagcttcaggattgtatcagccgagccacgacgaga
cacagggaggtccgcaaactcatcgacaaagtcacacagagtgacaagacaccgaaataa
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