Oncorhynchus kisutch (coho salmon): 109883904
Help
Entry
109883904 CDS
T09179
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109883904
09142 Cell motility
04810 Regulation of actin cytoskeleton
109883904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
CH
SH3_1
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
SH2_1
Filamin
Cor1
SRA1
C1_2
PH_10
DUF2935
Motif
Other DBs
NCBI-GeneID:
109883904
NCBI-ProteinID:
XP_031666272
Ensembl:
ENSOKIG00005047759
LinkDB
All DBs
Position
LG30:43087219..43200264
Genome browser
AA seq
839 aa
AA seq
DB search
MKYWRQCALWLINCKVLPPTHRVTGDSAQVFDLAQTLRDGVLLCQLLNNLKPHTINLKEI
NLRPQMSQFLCLKNIRTFLTSLCEVFGMKKTDLFEAFDLFDVRDFGKVMDTLSMLSYSTV
AQQAGIKPFPTEESLKDEDIYSHLKDLIDENVLEDEEELYAPVYGLDDTDEGGEIYEDLM
RTEQHPTLKQAENVRSCCLSEIKQTEERYTETLESIEKYFLNPLKKFFTASEIDKVFINI
PDLVKVHKSLMVEVQESILNKNALNLYQVFIAYKDRLLIYGIYCSHVEISITVLDFICKE
KEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTPDAADKNNLKMAL
DAMKDLAQYVNEVKRDKETLKEINQYQRSIENLNQPLESYGRPKGDGEVRMVSNVDKKKQ
DRHIFLFDGAVIVCKRRGDNYEMKDVIDLNYFKITNNPTQDRESKKWFYGFYLTHQQGQS
GFEFFFKTKELKKKWLDQFDMAISNIRPENSSNNFHQFRMHTFIRITTCSSCHLLLRGIF
NQGYLCLKCGLGAHKECLGRVGVCGRTDSAKLRPERAPTVRKQPDPGLPRMLVIRDYCGI
PSPQSAPPLTIHAGDIIELICADLHSSWWQGKILATREIGSFPSDAVRPCPCVPKPVDYS
AQLWFAGPMERQEATVKLMDRENSTYLIRHRTRESNEYAISIKFNDEVKHIKILTKNECF
YIAETRLFKTVLDLVDYYKQHSLREGFKSLDTTLQVPFREPSNGNNMPQGIRLTGTVFSP
RVVGIALARYDFSSRDTRELSLQEGDLVKIYTKMANGWWKGEVNGRVGWFPSTYVEEED
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaagtactggcggcagtgcgcattgtggctgataaactgcaaggtgcttcctccgacc
catcgggtaaccggggacagtgcccaggtatttgacttggctcagacgctccgggatggg
gtgctgctctgtcagctgctcaacaacttgaaaccacacaccatcaacctgaaggagatt
aaccttagaccacagatgtctcagttcctctgcttgaagaatatccggaccttcctgaca
tccctctgtgaggtgtttgggatgaagaagactgatctgttcgaggcctttgatctgttt
gatgtccgggactttggaaaggtgatggatactctgtccatgctttcttactccacggtc
gcacaacaggcaggaatcaagccctttccaacagaggagagtctgaaagacgaggatatt
tacagtcatctgaaggacctgattgatgagaacgttctagaggatgaggaagagttgtat
gctccagtctacgggttggatgacaccgatgaaggaggagagatctatgaagacctgatg
aggactgaacagcaccctacactgaagcaggctgagaatgttagaagctgctgcctctca
gagatcaaacaaacagaggagagatacacagagaccctggagtctatagagaagtacttt
ttgaatccactgaagaaatttttcactgcgtcagaaatcgacaaggttttcatcaacatc
cctgacctggtgaaagtccataagagtctgatggtggaggtgcaagagtccattctcaac
aagaacgccttaaacctctaccaggtcttcattgcctataaggacaggctactcatttat
ggaatctactgcagccacgttgagatatccatcacagtgttggactttatttgtaaggag
aaagaggacgtacgactaaagctagaggaatgttctaaaagagccaacaatgggaagttc
actctgagagatctactggttgttcccatgcagagagtcctcaagtaccatctcctacta
caggagctggtcaaacacacccccgacgcagccgacaagaacaacctgaagatggctctg
gatgccatgaaggacttggctcagtatgtcaacgaggtgaagagagacaaggagactctg
aaggagatcaaccagtatcaacgctccatcgagaacctgaaccagcccctggagagctac
ggacggcccaagggggacggagaggtccgaatggtgtctaatgttgacaagaagaaacag
gacagacatatcttcctgtttgacggggctgtgatcgtctgtaagagacgaggagacaac
tatgagatgaaggatgtgatcgatctcaactactttaagatcaccaacaaccccacccag
gatagagagagcaagaagtggttctatggtttctacctgacccatcagcaggggcagagc
ggctttgagttcttcttcaagaccaaggagctgaagaagaagtggctggaccagtttgac
atggcaatatccaacatcagaccagagaactccagtaacaacttccaccagttcaggatg
cataccttcatcagaatcactacctgtagctcctgtcacctgctcctcaggggtatcttc
aaccagggctatctctgtctgaagtgtggactcggagctcataaggaatgcctgggtaga
gtgggtgtctgtggaagaactgattctgccaagctgaggcctgagagggctccgacggtg
cggaaacaaccagacccaggtctccctaggatgctggtgatcagagactactgtggcatc
ccctctccccagagtgcccccccgttgaccatccatgctggggacatcatcgagctcatc
tgtgccgacctacacagctcctggtggcagggcaagatcttggcgacgagagagattggt
tcctttcccagcgatgccgttaggccatgcccatgtgtacccaaaccagtggattattca
gcccagctgtggtttgcagggccaatggagaggcaggaggcgacggtaaagctgatggac
agagagaacagcacctacctgatcagacaccggaccagagagtctaacgagtatgccatc
agtatcaagttcaacgacgaagtcaaacacatcaagatcctgacaaagaatgaatgcttt
tacatcgcagagaccaggttgtttaagactgtgttggacctggtcgactactacaagcag
cattctctgagagagggcttcaagagtctggacacaacactgcaggtaccattcagggag
ccaagcaacgggaacaacatgccccaaggcatccggctcactggcactgtgttctctccc
agggtggtgggcatcgcgttggcacgctacgacttcagctccagagacaccagagagctg
tctctacaagagggagacttagtcaagatctacaccaagatggctaacggctggtggaag
ggagaggtcaacggcagggtgggctggttcccctctacatatgtggaagaggaagactga
DBGET
integrated database retrieval system
