Oncorhynchus kisutch (coho salmon): 109884030
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Entry
109884030 CDS
T09179
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109884030
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109884030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HlyD_D4
HTH_3
Motif
Other DBs
NCBI-GeneID:
109884030
NCBI-ProteinID:
XP_031644937
Ensembl:
ENSOKIG00005036410
UniProt:
A0A8C7JBX3
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Position
LG14:complement(83248700..83286933)
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AA seq
524 aa
AA seq
DB search
MRQWCLPAAAPRTEPLPTGRLSPPLSDARMECCEVEPRYTIEQIDLLQRLRLSGMTKPQI
IQALASLERLDPDHRPPYCNDTHTANPTTNTTPTTASAPAPSSSSSSSSSLSLASVTTQT
PGQDGASLSPSNSYETSPPPLYPPAVGVQRSFSYDIMAEEDWDLEEKVEEYMRRDSNLVK
EEIKTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRSFYRWYLLEKNNPGL
RWSESQHGPAGLGLGLSGLGQGLGQNLGSGPRSARGGDRDVTATGNAATGTTAATAATAS
TTWGRQRELLMHLLPWYTAASSQPGATLSMRSLVKEEPDWRTGVSPGERGGVAGGPLRLR
RGSRFTWRKECQSIMESFFMENQYPDEAKREEIANACNSVIQKPGGKLSEFERVTALKVY
NWFANRRKEMKRRANIEAAILESHGIEVRSPSCHSNGEELEPHDYAEQVNQRFSEQEEIS
SRKDLDQQDPSSLAAVNVLPPPSPAPQVLEHKADESKRETVDEE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgcctcccggctgcggcaccgcgaaccgagcctctgcccacagggcgc
ctctcacccccgctgtcagatgccaggatggagtgttgtgaggtggagccacgctatacc
atcgagcagatcgacctccttcagcgtctccgtctctcagggatgaccaagccacagatc
atccaggctttagcatccctagagcggctagatcccgaccatcgccccccgtactgcaat
gacacccacaccgccaaccccacaaccaacactacccctaccacagcctccgccccagcc
ccctcctcctcctcctcctcctcttcctccctctccttggcctccgtcaccacgcagaca
cccgggcaggatggcgcctccctgtcgcctagcaacagctacgaaacctcgcccccgccg
ctgtaccccccggcagtcggagttcagaggtcattcagctatgacatcatggcggaggag
gactgggacctggaggagaaggtagaggagtacatgaggagggacagtaacctggtgaag
gaggaaattaaaaccttcctcaacaaccgcaggatctcccaggccatcgtgggacaggtc
acaggtatcagtcagagttacatctcccagtggttgctgcagcagggcttggagatgagc
gactccaaacgcagatctttctaccgttggtacctgctagagaagaacaacccagggctg
aggtggagtgaaagccagcatggcccggcgggtctgggcctggggctcagtggtctcggc
caggggctgggacaaaacctgggctctggacccaggtcagccaggggaggggacagagac
gtcacggcgacgggcaacgccgccacgggcaccacggccgctacagccgcgaccgcctcc
accacctggggcagacagagagaactgctgatgcacctgctgccatggtacactgcagcc
tcctcacagccaggtgctaccctgtcgatgcgctccctggtgaaggaggagcctgattgg
aggacgggggtcagccccggagagaggggcggggtggcgggcggtcctcttaggctgcgg
aggggaagcaggttcacctggaggaaggagtgccagtccatcatggagagtttcttcatg
gagaaccagtaccctgacgaggcaaagagagaggagatcgctaacgcctgcaactcagtc
atccagaaacccggaggcaagctgtctgagtttgagcgtgtcacggctctgaaggtgtac
aattggttcgccaaccgccggaaggagatgaagaggcgggctaatatagaggcggccatc
ttggagagtcatggtatcgaggttcgcagcccgagctgtcactcaaacggggaggagctg
gagccacatgactacgcagagcaagtgaatcaacgattctcagagcaggaagagatttca
tccaggaaggaccttgatcaacaagacccctcctcattggctgccgtcaatgtccttccc
cctcctagccccgcccctcaggtcctggaacacaaagctgacgaatcgaaaagggagact
gtggatgaggagtga
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