Oncorhynchus kisutch (coho salmon): 109884093
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Entry
109884093 CDS
T09179
Name
(RefSeq) synaptopodin-like
KO
K21112
synaptopodin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109884093
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
109884093
NCBI-ProteinID:
XP_020331688
Ensembl:
ENSOKIG00005037112
UniProt:
A0A8C7JBK1
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Position
LG15:complement(5916891..5979905)
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AA seq
1134 aa
AA seq
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METERGHMSVRRGVSWSPGGGRKPLQRVHGVNTDTGKRESDASSERRDYKAIKGQVTSTS
TNQLTRKTNLTRSASLSEKELKEARVRSQIIAAQLTVPSGCSNSRGVQLFNRRKQRVDAF
TLESCGERTGGEERDGDNRNNNLTWEGEREGPSGGTETDRQLNWKKGSETKPPLWSPPFG
SEVTGSDIMEDPGDEHIYEEVDVIQERHFQPVNEREEEEEERSGEREREEIYEDIEGEVK
DEIISVNDNNTGPVREEVGMNRGSYTYPTAPPETRNGFHSTQGSAGEIQNGGRVSMSLSR
QTPTIVNRTARPFFSPPTVQLKSPEARNPVMDNNIPPAPSYLTSTPPPAPSYSTPPLPAF
TATRPVAFSPPSCPVSFSPPPPLSSCPMSPLPAFPIHPPPPSQSLSSPPPKSTVMFPRST
PVPQYNPAPTAAPVSQYLPPNPLVTQYIPPSTSPRPNTFVPFTPQPIGQQNQQQPIKTGF
LEKGAAAIRRSSTGRKSMFTFKEKPVMAPNPELLSLVQGNDDRKKHGLRSVPDSAPEEEL
LALGAEASNFLAKEEVKAEAANVPEWSSCLKSSRIREPRGQYQPEQTLTNASGKGAELFA
KRQSRMEKYVVENQNVSGGGGGQMRSPSPTASLPPSWIYPSNMPGRVKAIANNTDLSARL
TRTLQTPQPGNRRPSQQASTPAPVLAEPTLEYGCTKIEMDLSRHQPYQLNSSLFIFNPVQ
DSASTVLSALPRVAPPPPKPMISSEAYSRQASLPSSNPQSHKYNSLPRFRPTMSPSLQPP
SGGIRGGDNYPPQHGGTPQLRDPRITSPVSAFSPERVASPRSSVQAPRPTFSAKRAGIEP
QMSKESPPTPTTTPTRTPQFTRRFSSPEGPPTSRPLHQATATSPASPPWEMRCKSPTVVN
QTTKPFSTASLSRPKQSTTTSPISSVSPWGSRCQSPNINQTTKPFSTTIPNSSSSRSSHQ
GTITSPLSPSPLSPPWGSRCQSPIVSPNNSKANHRLLAKNIINAAKRKNSPSPGALSGHN
LPISPLGDNTTHQHHQGYDHQHHYSSSKPPFSPYQPRAMGCQSPPFASPPPTPTGVIRSP
VRLYNTRSLTDSDASVESEDSGLRSPGLQRTHNTCPRGWGGSLRVKRGSVGTDL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagaggggtcatatgtccgtgaggagaggggtaagctggagcccaggtgga
gggaggaagccccttcagagggtgcatggcgtgaacacggacaccggcaaaagagagagt
gacgcatcttcggaaaggcgggactacaaagcgatcaaaggacaggtgacatcaacctcc
accaatcagctgactcggaaaaccaacctgacgcgtagtgccagcctatcagagaaggag
ttgaaggaggcgagggtgaggtcacagatcatcgcggcccagctgaccgtcccgtctggc
tgctccaactcccgcggagtccagctcttcaaccgccgcaagcagagggtcgacgccttc
acgctagagagctgcggggaaagaacgggaggagaggagagagacggagacaacaggaac
aacaacctgacatgggaaggggagagggagggtcctagtggagggacagagacagacaga
caactgaactggaagaagggcagcgagacaaaaccaccactctggtcgccaccttttgga
agtgaggtcacaggaagtgacatcatggaggacccaggtgacgagcacatctacgaggaa
gtggacgtgatacaagagagacacttccagccagtgaacgagagagaagaggaggaggaa
gagaggagtggagagagagaaagagaggagatatacgaggatattgagggtgaagtgaag
gatgagattatatcagtaaatgacaacaacactggtccagtcagagaggaagtggggatg
aatagggggtcatacacataccccacagctccccctgagacccgtaatggcttccacagc
acccagggctctgctggagagatccaaaatggcgggcgagtttctatgtccctgtccaga
cagacccccaccatcgtcaaccggacagccagacccttcttctccccacccaccgtacag
cttaagtccccagaggccaggaatcctgtcatggataacaacatacctccagctccctcc
tatctgacctccactcctcccccagccccctcctactccactccccctctccctgctttc
actgccactcgccctgtcgccttctcccctccgtcttgccctgtctccttctcccctcct
ccccctctttcctcatgccccatgtctcctctcccagccttccccatccatcctcctcct
ccctcccagtctctctccagtcctcctcccaagtctaccgtcatgttccctaggtctaca
cccgtcccccagtacaaccctgctcctacagctgccccagtgtcccagtatctacccccc
aaccctcttgtcacccaatacatccctccttcaacctcccccagacccaacacctttgtc
cccttcacccctcagcctattggtcaacagaaccagcagcagccaatcaaaacgggcttt
ctggagaaaggggcggcggccatcagacgatcgtcaacaggcaggaagtccatgttcacc
tttaaggagaagcctgtcatggcacccaaccctgaactcctctctctggtccaggggaac
gatgataggaagaagcacggcctccgctccgttcccgactcagccccagaggaggagctg
ctggctctgggggccgaggcctctaacttcttagccaaggaggaggtgaaggcggaggct
gccaatgtgccggagtggtcctcctgtctcaagagctccagaatcagggaacccaggggg
cagtaccagccagagcagaccctgaccaacgcatcagggaagggggccgagctgttcgct
aagcgccagtccaggatggagaagtacgtagtggagaaccagaatgtctccggtggtgga
ggtggtcagatgaggtctccgtctcccaccgcgtctctgccgccatcttggatctatcca
tctaatatgcctggtcgggtcaaagctatcgctaacaacactgacctcagcgccaggctg
acacggaccctccagacccctcagcctgggaacaggaggcccagccagcaggcttcaacc
ccagccccggtccttgcagaaccaacccttgagtacggctgcaccaagatagagatggac
ctctccaggcaccagccctaccagctcaactcctccctgttcatcttcaacccagtccag
gactctgccagcaccgtgctgagcgctctgccccgagtggcccctccaccacccaaaccc
atgatctcatctgaggcctactccaggcaggcttccctgccctcctccaaccctcagtca
cacaagtacaacagcctgccccgcttcaggcctaccatgtccccgtcacttcagccccca
tcaggaggaattagaggtggggataattatcctccacaacacggggggactccacagctg
agggaccccaggatcacctctcctgtctctgccttctctccggagagagtggcctctcct
cggtcgagcgtccaggcacccagacccaccttctctgccaagagggcagggatcgaaccc
cagatgagtaaggagtcccctccgacccccaccaccacccccaccaggacaccacagttc
acccgtcgattcagcagcccagagggaccccccacttccaggcccctccaccaggcgaca
gccacctcccctgcctccccaccctgggagatgaggtgcaagtcacccacggtggtcaac
caaaccaccaaacccttctccacagcctctttatccaggcctaaacaatccactaccacc
tcacctatatcgtctgtatctccctgggggtcccgctgtcaatcccctaatatcaaccag
acaaccaagcctttctccaccaccatccccaactcttcctcttccagatcctctcaccaa
ggcaccatcacctctcctctctccccctcacccctatcccctccctggggttccagatgc
cagtctcccatcgtcagccccaacaactccaaggcaaaccatcgcctgttagccaagaac
atcatcaacgccgccaaacgtaaaaacagcccgtccccaggtgctctgagcggccacaac
ctcccaatctccccactaggtgacaacaccacccaccagcaccaccagggctacgaccac
cagcaccactacagcagctccaaaccccccttcagcccctaccagcccagggccatgggg
tgccagtctccccccttcgccagccctcctcccacccctacaggggtgatccggtcccca
gtaaggctctacaacaccaggtccctcactgactcggatgcttcggtggagtcggaagac
tctggcctgaggtctccaggactgcagcgtacccacaacacctgtccccggggctggggc
ggcagcctgagggtgaagaggggtagtgttggcaccgacctctag
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