Oncorhynchus kisutch (coho salmon): 109884114
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Entry
109884114 CDS
T09179
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X2
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109884114
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109884114
04082 Neuroactive ligand signaling
109884114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109884114
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
109884114
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
109884114
NCBI-ProteinID:
XP_020331710
Ensembl:
ENSOKIG00005004383
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All DBs
Position
LG3:48782241..48844775
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AA seq
880 aa
AA seq
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MRVFLLAFFISCSCAGGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANTLYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKAEKVLLFSQDTNLTSMLLEAKDLEARVIILSASEDEAASVYKAARQLNMTGSG
YVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHINDAVAVVAQSIQELFEKENITEP
PRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEFNDDGDRRFATYSILNYQKTRLVQV
GIFNGTQVVMNPQRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVQPTTSDGTCQKE
KTVNGLKDVQKVICTGPNGTIPGQPIVPQCCYGFCIDLLIKLADTMNFTYEVHLVADGKF
GTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKK
EIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLS
SAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERI
TGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDN
KLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILSSHENGF
MEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDAR
RKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPSVSTVV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtatttctgcttgcgtttttcatctcctgctcctgtgcgggtggtggatgtgaa
cccaagattgtcaatatcggagcggtcctgagccagaagaggtatgaacaggtgttcaag
gacgccgtcacccaggcaaacacgctgtatgggaaagataagttcaagatgaacgccatc
tctgtcactcataaacccaatgcaattcagatggctctctccgtctgcgaggacctaatc
tcgaaccaggtgtatgccattctggtgagccacccgcctcaatcgaatgaccatctgacc
cccacaccggtgtcctacaccgcagggttctaccgtatccctgtggttgggctcaccacc
cgcatgtccatctattcggacaagagcatccacctgtctttcttgcgtaccgtgcccccc
tactcccaccaagcccaggtgtggttcgacatgatgagagagttccgctggaaccacatc
attctgatagtgagtgacgaccacgagggccgcgctgcccagaagaggctggagaccctg
ttggaggagagggagaccaaggcagagaaagttctcctgttcagccaagacaccaacctg
acatccatgctgctggaggccaaggacctggaggctcgcgtcatcatcctctctgccagc
gaggacgaagcggcgtcggtctacaaagctgcccgccagctcaacatgacgggctctggc
tacgtgtggctggttggagagagggagatgtctggtaaagctttgagtgaagcaccagat
ggcttgctcggccttcagctcatcaacggcaagaacgagtcggcgcatatcaacgatgcc
gtggctgtggtggcacagtccatccaggagctctttgagaaggagaacatcacagaaccg
cctcgcggctgtgtaggcaacacaaacatctggaggactggaccgctcttcaaacgagtg
ctgatgtcatccaagtacccagatggcctgacaggacgcatagagtttaatgacgatggt
gacaggcggtttgctacctacagcatcctcaactaccaaaagaccaggctggtgcaagtg
ggcattttcaacggcacccaagtggtgatgaatccgcagaggaagatcatttggccagga
ggagagacggagaagccaagaggataccagatgtctaccagactaaagatagtaaccatt
catcaggagccatttgtctatgtccaacccacaacaagtgacggaacttgccaaaaagag
aaaactgttaatggacttaaagatgtccaaaaagttatatgcactggccccaatggaacc
atcccaggacagcctatagtaccccaatgctgctacggcttttgcattgacctgttgatt
aaactagcggataccatgaacttcacctatgaggttcatctggtggctgatgggaagttt
ggtacacaggagcgggtgaacaacagcaacaagaaggagtggaacggcatgatgggagaa
ctcctgggtggcctggcagacatgattgtggctccgctcacgatcaacaacgaacgcgcc
cagtacatcgagttctcaaaaccctttaagtaccaggggcttaccatcctcgtgaaaaag
gaaataccacgcagtactttggattcgttcatgcagccctttcagagcaccctgtggctg
ctggtgggtctatcggtccatgtggtggcggtgatgctctacctattagaccggttcagc
ccatttggaaggtttaaagtgaatagcgaagaagaagaagaggacgccctcaccttatcc
tccgccatgtggttctcttggggggtccttttgaactccgggataggagaaggagcaccc
cggagcttttcagcaaggatcttaggtatggtgtgggctggatttgccatgatcattgtg
gcatcctacacagccaatctggcagccttcctagtgttggaccggcctgaggagcgcatc
accggcatcaatgaccccaggctgcgaaacccatcagacaagttcatctacgccacagtg
aagcagagttcggtggacatctacttccggcgccaagtggagttgagcaccatgtaccgc
cacatggagaagcacaactacgaaagcgctgctgaggccatccaagctgtgcgcgacaac
aaactgcacgcgttcatctgggactctgccgtcctggagtttgaggcatcacagaagtgt
gacttggtgacaacgggagagctgttcttccgctccggcttcggcataggcatgcggaag
gacagcccttggaagcaaaatgtttccctgtccattcttagctctcatgagaatgggttc
atggaggaactagataaaacctgggtgagataccaggagtgtgactccaggagtaatgcc
ccggccaccctcacttttgagaacatggcaggtgtgttcatgttggttgctgggggtatc
gttgctggaatcttcctcatctttattgagattgcgtataagcgccacaaagatgcccgc
aggaagcagatgcagctggccttcgctgcggtcaacgtgtggaggaagaacctacagcct
tatcccacggacatcacaggccagctcaacttgtcagacccctctgtcagcacggtggtg
tga
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