Oncorhynchus kisutch (coho salmon): 109884121
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Entry
109884121 CDS
T09179
Symbol
trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109884121 (trpa1)
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109884121 (trpa1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
DUF3447
DBB
PKD_channel
Motif
Other DBs
NCBI-GeneID:
109884121
NCBI-ProteinID:
XP_031652805
Ensembl:
ENSOKIG00005035830
UniProt:
A0A8C7JSR9
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All DBs
Position
LG18:complement(80661652..80744654)
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AA seq
1125 aa
AA seq
DB search
MQLTKEVAPQNGSYKCVIDNDERRSHQLSVKTDITLESVNLFEWARGGDVSQLEGLVRRN
PVLLREQDDSGASLVHHAAGAGNTPVIRFICSITVRDGWKVYDDEGSMPLHWAVERNQPD
SCRALLELGAEPNVLNKALMSPLHLAVSHTHNHLVQLLLSHYKTESNLEGGLGNTPVMLA
CSINNTEALSILLSHGARLSSQNKLGHYAIHAAAFAGSKKAMDVILKAGEEMGHSIEEHI
NFLDKSYSSPLHLAVRGGNMDIIEFCIHKGAKIDQQQVDRSTALHFACSQGATEAVKLML
SSYSRLDSIINLPDGACQTPLHRATIFDHTELAEYLISKGADIDYIDSKGLSPLLLATNC
GAWRTVALLLSKGANVKIKDQSGCNFLHLAILQPKGLKNLSGDVLQHSSVKDLLSNEDNE
GCTPLHYACRLGIHESVKNILVLQVSLDRKSKDKKSALHFAAQYGRVNTCQRLLETITDS
RLLNEGDERGLTPLHLASGGGHTKVVELLLRKGALFHCDYKGRTCLHHAASEGYTQTMKI
VLATNINLLDKLDEDGSTALHLAAREGHVAAVRLLLQRGAEVSLNKNHASFFHEALQHGR
KDVINAIIDSDRCTHILSMFKRDAGHRCPVLDLVDLLPESCKYLLDRCIRESDDDTRSPD
YHIDYNFQWLQAPIALTKHAKVDKGLKIQPLATLNAMVKYNRIELLSHPVCKKYLEMKWV
AYGSAAHLLNLFVYLLGLLPLTHLIVSLRPSLDYTGPDNTTAVTMVPISVREQGSFLSSC
MVMVLVMNIYSMGKEVTQMYHQRLTYFKDPFNYQDWTVAIFSLLFVIPLNFNVEGSWYWQ
AGAMAVFQSWISFLFYLQRFEHFGIYVVMFNEIAKTLWKILLLFFFLMLAFALVFHALML
NQKEFERLDLSGVQIFVMMVGELNYQSNILDIYLDNKLPFPFLTFYMFVVFVILMPILLM
NMMIGLAVGDIAEVKRTAGLKRIAMQIELHTNLEEKMPYWLLKRVDQSFFTIYPNRKCSK
ASILNFWSQGEANEVQIRLMTNSSNSTSVEAELRRQKYRLKEISSVLEKQHDLMKLMIQK
MEITSEADEHDGPTEVKGYRQRSNWGQAKGSNWIPLMKVLERKNV
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaccaaggaagtggcacctcagaacggttcctataagtgcgtgatcgacaat
gacgaaagaagatcccaccaactctctgtaaaaacagacatcactctggagtccgtaaac
ctgtttgagtgggctcggggaggtgatgtgtcccagctggagggcttggtgagaaggaac
ccagtgttactgagggaacaggatgactctggtgcctctctggtccaccacgctgctggt
gcaggaaacacccctgttatcaggttcatctgcagcatcacagtcagagatgggtggaag
gtgtatgatgacgaggggtctatgccgctgcactgggctgtggagaggaaccagccagac
agctgcagggctctgttagagctgggggctgaacccaacgtcctcaacaaggccctgatg
tcacctctacacctggctgttagccacacacacaaccatctggtccagctcctgttgtct
cactataagacagagtctaacctagaaggaggtcttggcaacactcctgtcatgttagcc
tgctccatcaataatactgaggcgctctctatactgctgagccatggggcgcggctctcc
agtcagaacaaactgggccactatgctatccatgcagctgccttcgcaggctcaaagaaa
gccatggatgtcatcctcaaggctggagaggagatgggtcattccatagaggaacacatt
aatttcctggataagtcatacagtagtccacttcacctggcggtcaggggaggcaacatg
gacatcatcgagttctgcatccacaaaggagccaagatcgaccaacaacaggtggaccgg
tccacagctctacatttcgcctgttcccagggagctacagaggcagttaaactgatgctg
tcctcctacagcagactggacagcatcattaacctgcctgatggagcctgccagacacct
ctacacagggcaactatatttgatcacacagaattggcggagtacctcatttcgaagggt
gcagacattgactacatagacagtaagggtctttcccccttgctgctggctactaactgt
ggagcctggagaactgtggctcttctgctgtccaaaggtgccaacgtgaaaataaaggac
caatcaggatgtaacttcctccacctggccatcctgcaacccaaaggcctcaaaaacctc
tccggggacgtcttgcagcacagcagtgtgaaggatctgttgagtaacgaggacaacgag
ggctgtactcctctccactacgcctgcagactgggcatccacgaatcggtcaagaacatc
ctggttctacaggtctctctggaccgcaagtccaaggacaagaagtcagccctgcacttc
gctgcccagtatggtcgtgtcaacacctgccagcgtctgctggagaccatcacagactcc
cgtctgctgaacgagggggacgagagaggcctgacccccctacacctggcctctggaggg
ggacacaccaaggtggtggagctgctgcttcgtaaaggagccctgtttcactgtgattac
aaagggaggacctgtttacaccatgcagcgtcagaggggtacacccagaccatgaagatc
gtcctggccaccaacatcaatctactggacaagctggatgaggatgggagcactgcgctg
cacttggcagcccgggagggtcatgtagcagcggtgagactgctgctccagagaggggcg
gaggtcagcctcaacaagaaccacgcctccttcttccacgaagcactgcaacatgggagg
aaggacgtgattaacgccatcatcgacagtgacagatgtactcacatcctgagtatgttc
aaacgtgatgctggccatcgttgtccagtgttggacctggttgacttgctgccagagtct
tgcaagtaccttctggatcgctgcattagagaatcagacgacgataccagaagtcctgac
taccatatcgactacaatttccagtggcttcaggctccaatagcactgacgaagcatgca
aaggtagacaaaggcctgaagatccagcctctggccactctgaacgccatggtgaaatac
aaccgcatagagctcctctcacaccccgtctgcaagaaatacctggagatgaagtgggtg
gcctacgggagcgctgcccaccttctgaacctgtttgtgtacctgctgggtctgcttcct
ctcacccacctcatagtgagcctgagacccagcctggactacaccggccctgacaacacc
acagctgtcaccatggtgcccatttccgtcagagagcaaggttccttcctgtccagctgc
atggtgatggtgctggtgatgaacatttattccatggggaaggaagtgacgcagatgtac
caccagcgtttgacttacttcaaggatccctttaactatcaggactggaccgtggccatc
ttctctcttctcttcgtcatccccctgaatttcaacgttgaggggtcttggtactggcag
gctggggcgatggcagtctttcaatcctggattagcttcctcttctatctgcaaaggttt
gagcactttgggatttacgtggtgatgtttaacgagattgcgaagacattgtggaaaatc
ctactgcttttcttctttctgatgctggcgtttgccttggtcttccatgccctcatgctc
aaccagaaagagtttgagcgactggacctgtctggggtccagatctttgtgatgatggtt
ggagaactgaattaccaaagcaacattctggacatctacctagacaacaaacttccattt
ccattcctcactttctatatgtttgtggtgtttgtcatcctcatgccgatcctgctgatg
aacatgatgatcggtttggcagtcggagacatcgctgaggtaaagagaaccgcaggtctg
aagagaatagccatgcagatcgagctccacaccaatctggaagaaaagatgccgtactgg
ttgttgaagagagtggaccagtcattcttcaccatctaccccaaccgcaagtgctccaag
gcctcaatactaaatttttggagtcaaggagaagcaaacgaagtgcagattcgtctaatg
accaactcatcaaattcaacctctgtcgaggctgaactacgcagacagaagtacagattg
aaggagatatccagtgtgctggagaagcagcacgacctgatgaagctgatgatccagaag
atggagatcacatcggaggcagacgaacatgacgggcccactgaggtcaaaggttacagg
cagaggtcaaactggggccaagccaagggctccaactggatcccgctgatgaaggtcctc
gagcgcaagaacgtttga
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integrated database retrieval system
