KEGG   Oncorhynchus kisutch (coho salmon): 109884212
Entry
109884212         CDS       T09179                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03030  DNA replication
oki03410  Base excision repair
oki03420  Nucleotide excision repair
oki03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109884212 (rfc3)
   03410 Base excision repair
    109884212 (rfc3)
   03420 Nucleotide excision repair
    109884212 (rfc3)
   03430 Mismatch repair
    109884212 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oki03032]
    109884212 (rfc3)
   03036 Chromosome and associated proteins [BR:oki03036]
    109884212 (rfc3)
   03400 DNA repair and recombination proteins [BR:oki03400]
    109884212 (rfc3)
DNA replication proteins [BR:oki03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109884212 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    109884212 (rfc3)
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109884212 (rfc3)
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109884212 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    109884212 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 AAA_5 ABC_tran DUF2247
Other DBs
NCBI-GeneID: 109884212
NCBI-ProteinID: XP_031664463
Ensembl: ENSOKIG00005040491
UniProt: A0A8C7JVI4
LinkDB
Position
LG28:47708443..47720174
AA seq 356 aa
MSLWVDKYRPTSLGKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLHIEHQTVTAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTMAQSQQ
IQTSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIGPIRSRCL
AVRVPLPSTEEVCNVLSTVCRKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SADQDIPETDWEVYLRETANAIVSQQSPQRLLEVRGRLYELLTHCIPPEIIMKGLVTELL
GNCDGQLKAEVTHMAAHYEHRLQQGNKAIYHLEAFTARFMAIYKKFMEDGLDAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtggacaaatacagacctacgtctctggggaaactggactaccacaaa
gaacaagcaaaccagctgaaaaacctggtccagtgtggggacttccctcatctgttggtg
tacgggccgtctggagcagggaagaagactcgtatcatgtgtctgctgagagaactgtac
ggagccggagtggagaaactgcacatagaacaccagactgttacggctccctctaagaag
aagattgagatcaacaccatagccagtaactaccacctggaggtcaacccaagtgatgct
ggtaacagtgaccgtgtggttatccaggaactgatcaagactatggcccagtctcaacag
atccagaccagcacccagagggagttcaaagttgtcctgttgacagaggtggaccgcctc
actaaggatgcccagcatgcattgcgtcgtaccatggagaagtacatgtccacctgccgg
ctcatcctctgctgtaactccacctccaaagtcattggaccaatcaggagcaggtgtctg
gctgtcagggtgcccctacccagtacagaggaggtgtgtaatgttctgtctacagtgtgt
aggaaggagggcctgcttctcccccctgagttggccaaacagatatcagagaagtctgga
cgcaacctccgcaaagcactgctgatgtgtgaggcctgcagagtgcaacagtacccgttc
tcagcagaccaggacatcccagagaccgattgggaggtttacctgagagagacggccaac
gccatcgtcagtcagcagagtcctcagaggttgttagaggtgagggggagactgtatgag
ttgttgactcactgcattcctcctgagatcatcatgaagggcctggtaacagagctgcta
ggtaactgtgacggccagctgaaggcagaggtgactcacatggcagcccactacgaacac
cgactgcagcagggcaataaggccatctaccatctagaggccttcaccgccaggttcatg
gccatctacaagaagttcatggaggacggactggacgccatgatgttctga

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