Oncorhynchus kisutch (coho salmon): 109884279
Help
Entry
109884279 CDS
T09179
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109884279
09123 Folding, sorting and degradation
03018 RNA degradation
109884279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109884279
03041 Spliceosome [BR:
oki03041
]
109884279
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109884279
mRNA degradation factors
5'-3' decay
Lsm complex
109884279
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109884279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
109884279
NCBI-ProteinID:
XP_020331854
LinkDB
All DBs
Position
LG18:79160073..79162437
Genome browser
AA seq
91 aa
AA seq
DB search
MAATPATNPSQLLPLELVDKCIGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcagccactccagctacgaatccgtcacagttgctcccacttgagctcgtggacaaa
tgtataggttcccgaatccatatcgtcatgaagaacgacaaagaaattgttggcaccctg
ttgggttttgacgattttgtcaacatggtgctcgaggacgtgacagaatttgaaatcaca
ccggagggaaggaggatcaccaaactggatcagatactgctcaacggcaacaacatcacc
atgctcatacctggaggtgaagggcccgaagtatga
DBGET
integrated database retrieval system
