Oncorhynchus kisutch (coho salmon): 109884295
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Entry
109884295 CDS
T09179
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04814
Motor proteins
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109884295
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109884295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109884295
03036 Chromosome and associated proteins [BR:
oki03036
]
109884295
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109884295
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109884295
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
109884295
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
109884295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
Filament
Motif
Other DBs
NCBI-GeneID:
109884295
NCBI-ProteinID:
XP_031643493
Ensembl:
ENSOKIG00005031453
LinkDB
All DBs
Position
LG14:complement(2663652..2774459)
Genome browser
AA seq
1293 aa
AA seq
DB search
MSSQTTRRNVYTRTTSSGSSRMSSDGGGRPAKVGSRVEVIGKGHRGTVAYIGATLFSTGK
WVGVILDESKGKNDGTVQGKRYFTCHENHGIFVRQSQIQLVDDGADTTSPDTPEPASNKV
PKHEILETLKSTKLQRGPKPKKVVHASRTSSTPAPRKTTARRPKPSRPAGTGASKAGPSG
SVSASAGEMSSSEPSTPTQTPLGAPIIPSPGGLLSPSAPPPPLPSKEEESLRGQVKDLEE
KLETLRMKRTEDKVKLKELEKHKIQLEQLQEWKTKMQEQQNDLTKQLKEAKKEAKEAQEA
KEHYMEEMADTADAIEMATLDKEMAEERAESLQQEVESLKEKLEELVMDLEILKHEIEEK
GSDGAASSYHVKQLEEQNGRLKEALVRMRDLSVSEKQEHVKLQKQTERKSTELDTLRTQR
EKLQEEMKLAERTIDELKEQVDGALGAEEMVETLTERNLDLEEKVRELRETVVDLEAINE
MNDELQENARETELELREMLDLGGGRVREAEKRVEAAQETVADYQQTIKKYRELTAHLQE
VNRELTSQQEATAEQQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVGQANRQVSLLT
SFMPDSFLRHGGDHDCILVLLLIPRLIFKAELISKQAQEKFDLNDNCVERSGMRGAAGEQ
LSFAAGLVYSLSLLQATLHKYEQALNQCSVEVYQKIGTLYPEMGVHERSLDFLIDLLHKD
QLDETVHVAPLTKAIKYYQHLYSIHLAEQTEDCTMHLADHIRFTQSALDCMCVEVGRLRA
FLHTGQEKTDLAVLLKDLETSCSDIRQFCKKIRRRMPGTDVPGIPAALTFLQQVADILLD
CRKHLTWVVAVLQEVAAAGAQMVAHLGEQEGLSALKLEDVAFKAGEQIYGTQGSNPYGCL
RQSCCIVIATMNKMATAMQEGEYDADRPQITTLPPVELRATALRAEITDAEGLGMKLEDR
DTVIKELKKSLKFKGEELSEASVRLSLLEKKLDSSSRDADERVEKIQTQLDETQTLLKKK
EKEFEETMDALQADIDQLESEKADLKQRLNSQSKMTMDGLRGAPASGIASIVTGMTGEEQ
KATLASMGPSIGPGMGPGSGVPVIDSPLLTQQIEAQRHSIKHLKNENNRLKAEKMRAQLS
SLPPLHVSKLPTRDGSHPEVLSSALYRKTDQLLDTLLQMSANVKVVDITGKSPVTPSAQL
LEHTARLQSLSNTLDRLKDEVSEHVVTQRPGARALSDFATFPCSSFVKVQEEKRGDMVLV
GKVMMPCSRGQEQVHRLVLSQPQLQRVHRLLLT
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcagactactaggaggaatgtatacacccggaccaccagtagtggcagcagc
aggatgagttcagacgggggtggccggccggccaaggtgggttcccgggtggaggtgatt
gggaaggggcaccgcggaacagtggcatatatcggtgcaacgctcttctccacagggaag
tgggtgggagtgatcctcgacgagtcgaaggggaagaacgatggcacagtccaggggaag
agatacttcacctgccatgagaaccatggcatcttcgtacggcagtcacagatccaactg
gttgatgatggagcagacaccacctctcctgacaccccagaaccggcctccaacaaggtc
cccaaacacgagatcctggagacactcaagtccactaaactgcagcgaggacccaagccc
aaaaaggtggtgcacgcttctcgaacctcctcgactcctgcccccaggaagactacggcc
agaaggcccaagcccagccgtcctgcgggaaccggagcctccaaggcggggccctctggg
tctgtgtctgcctcggctggagagatgagcagcagcgagccctccaccccgacacagacc
cccctgggggcccccatcatcccctcacccggggggctcctctccccttcagccccccca
cctccactccccagcaaggaggaggagtctctgcgaggtcaggtgaaggatctggaggaa
aagttagagactctgaggatgaagaggacagaggacaaggtcaagctgaaggagctggag
aaacataagatccagctggagcagctccaggaatggaagaccaagatgcaggagcagcag
aacgacctgacaaaacaactcaaagaggccaagaaggaggcgaaggaggcccaggaggcg
aaggagcactacatggaggagatggcggacacagctgacgctatagagatggccacgctg
gacaaggagatggctgaggagcgggcagagtccctgcagcaggaggtggagtctctgaag
gagaaactggaagagctcgtcatggacctggagatcctcaaacacgagatagaggagaaa
ggttcagacggtgctgcttccagttaccatgtgaaacagctggaggagcagaacggcagg
ctgaaggaagctctcgtcaggatgcgtgacctgtctgtgtcggagaagcaggaacatgtg
aagctccagaaacagaccgagaggaagagcacagagctggacaccctgaggactcagaga
gagaaactccaggaggagatgaaactggccgagaggaccatcgatgaactcaaagaacag
gtggatggggcactaggagctgaggagatggtggagactctgacagagaggaatctagac
ctggaggagaaagtcagagagctgagagagaccgtcgttgatctggaagccatcaacgaa
atgaatgatgaacttcaggagaacgccagagagacggagctggagctcagagagatgctg
gatctgggcggaggcagggtcagggaggcggagaaacgggtggaagctgctcaggagacc
gtagctgactatcaacagaccatcaagaagtaccgtgagctgaccgctcacctgcaggag
gtgaacagagagctgaccagccagcaggaagccacagctgagcagcagcagcagcctcca
gctgagatgtttgacttcaagatcaagtttgctgagactaaggcctatgccaaggccata
gagatggagctgaggaagatggaagtgggccaggccaacagacaggtgtctctcctcaca
tccttcatgcctgactccttcctgcgtcatggaggagaccacgactgtatcctggtgctt
ctgctcataccaagactaatcttcaaggcggagctgatcagtaagcaggcccaggagaag
tttgatctgaatgacaactgtgtggagaggagcgggatgagaggagcggctggggaacag
ctgagctttgctgcaggactcgtctactctctcagtctgctacaggctacactacataaa
tacgaacaagcgctgaaccaatgcagcgtggaggtgtatcagaagatcgggacgctctac
ccggagatgggcgttcacgagcgttccctggacttcctgattgacctgctgcacaaagac
cagctggatgagacggtgcatgtggcgccgctcaccaaggccatcaaatactaccagcac
ctgtacagtatccacctggcagagcagacagaagactgcaccatgcatctggctgatcac
atcaggtttacccagagtgcgttggactgtatgtgtgtggaggttggtcgtctgcgtgcg
ttcctacacacagggcaggagaagacggacctggccgtgctgctgaaggatctagagact
tcctgttctgacatcagacagttctgtaagaagatccgccgacgcatgcctggtacggac
gtacctgggatacctgctgcactcaccttcttacagcaggtggcagatattctgctggac
tgcaggaaacacctgacctgggtggtggctgtgctgcaggaggtggcggctgcaggggcg
cagatggttgcccatctaggggagcaggagggactctccgcactcaaactagaggacgtg
gcctttaaggctggagagcagatctatggaactcaaggttctaacccctatgggtgcctg
cgccagtcctgctgcatcgtcatagcaaccatgaacaagatggccaccgccatgcaggag
ggagagtacgacgcagatagaccccagatcacgacacttcctccggtggagctgcgtgcc
acagccctcagagcggagatcacagacgcagaaggactgggcatgaagctggaggacaga
gacacagtcatcaaggagctcaagaagtcactcaaattcaagggagaggagctgagtgag
gctagcgttcggctcagtctgttggagaagaaactcgacagttcatctagagacgcagac
gagcgcgtagagaagatccaaactcaactagacgagactcagactctgctcaagaagaaa
gagaaggagtttgaggagaccatggacgcgctgcaggctgatatcgaccaattggagtcg
gagaaggcggatctgaagcagcgtctgaacagccaatcaaagatgaccatggacgggctg
agaggagcgccagcgtcgggaatcgcctccattgtcacggggatgacaggagaagaacag
aaagcgactctggccagtatgggtcccagtattggtcccggtatgggtcctgggtcgggg
gtcccggtgatagactctcctctcctgacgcagcagattgaggctcagagacacagcatc
aaacacctgaagaatgagaacaacagactcaaggctgagaagatgcgtgcccagctgtcc
tccctaccacctctccatgtctccaagctccccactagagacggctctcacccagaggtg
ctctctagcgccctctatcgtaagactgaccaattactggacacgttactgcagatgagt
gccaacgtcaaagtggtggacatcactggcaaatccccagtaactcctagtgcccagctg
ctggaacacacagccagactccagtcccttagcaacactctggacagactgaaggatgag
gtatcagaacatgtggtgacccagagacctggagctagagccttgtctgactttgccacg
ttcccctgctcctccttcgtcaaggtccaggaggagaagaggggggacatggtgctggtg
gggaaggtgatgatgccgtgttcccgtggtcaggagcaggtccaccgtctcgtcctatca
cagcctcagctccaaagagtgcaccgcctcctgctgacatag
DBGET
integrated database retrieval system
