Oncorhynchus kisutch (coho salmon): 109884498
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Entry
109884498 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific phospholipid-transporting ATPase ABCA4-like
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109884498
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109884498
Transporters [BR:
oki02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109884498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
MukB
AAA_15
Motif
Other DBs
NCBI-GeneID:
109884498
NCBI-ProteinID:
XP_031665745
Ensembl:
ENSOKIG00005047898
LinkDB
All DBs
Position
LG30:complement(44004431..44113392)
Genome browser
AA seq
2173 aa
AA seq
DB search
MNTGSQIRLLLWKNWTLRKRQKIRFLVEILWPVVLFIGLVWLRKANPLYKQHECHFPNKA
MPSTGIIPWIQGIFCNANNPCFKHSTXGRGPGVVSNYNNCILARFWADSNELLFDDPEFQ
QLGRLWEDMAVMNNFMDTICNTPEQIAGRGLKIEDILKDDEMLTAFLLRDVGLSESVVHQ
LVNAQVRPEQFAHGVPDLHLKDIACSQALLERFIIFPSRRGMYGVRNAMCALTQQRLQKI
EDMLYANVDFFKIFRLLPRVLDNHTDGPDLRYWGRVLTAVSEKVQVLFERNSTKDLLKIV
YPLFRAGGPSSFSQLMSIVSALFCGYPDGEGSRVLSFNWYEDNNYKVFLGVNGSKNHDYV
YDMTTTPFCNDLMQTLESNPVTKIVWSSVKPLFMGKILYAPDSPAIRLILKSANTTFEEL
ERLMTMGKAWEEVGPQIWRFFNAGLQINMIRDTIRNPTVADLIDRSMEDTEFSSKDILNF
LYNGLEEDREETMPSFDWRNVFNLTDQAVRMFNQYGECISLDKFKPHTDEDQLTHQALFL
LEENKFWAGLVFLDVYPWTTTVPRHVKYKIRMDIDQVERTNKIKDRYWDPGPRADPMEDL
RYIWGGFAYLQDMVEHGILKIQTGHDWPLGVYVQQMPYPCYVDDLFMLTLNRCFPIFMVL
AWIYSVSMTVKSIVLEKELRLKETLKAMGVTNGVIWYTWFIDSFIMMTASTALLTLIIMA
GKVLNYSNPLVVFLFLLTFTMTTIMQCFLLSVFFNKANLAAACSGIIYFTLYLPHILCVA
WQDRITKNAKITASLLSPVAFGFGTEYLSRYEEQGLGLQWDNIGTSPLEGDAYSFFTSIG
MMMFDAVLYGFLAWYLDNVFPGQYGIGRPFYFPFQPSYWQRSEPALSNIPDSDPEMPDVD
KDVDSMCSPRRCNGVGVKKPCKHQDKRERMEREREELLKRQEEEQNKEKQEEDLTGQLFF
EPEPAGLTVGVEIQDLVKVFPGGSRPAVDHLSIAFYEGQITSFLGHNGAGKTTTMSILTG
LFPPTSGTAFINGKDIRTDMDSIRTSMGMCPQYNILFKHLTVEEHILFYSMLKGTSQAEA
QQAVEVMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSKIVILDEPTSGVDPYSRR
SIWDLLLKYRTGRTVILSTHHMDEADLLSDRVAIISKGQLHCCGSPLFLKNCFGVGFYLT
LVRRMKDVRKKENECDCASECSCTCSTCTKVKEESQGQSQQLERALDGDVDNITTLIHHH
VPEAKLIEAIGQELTFLLPNKGFKHRAYASLFRELEETLGDMGLSSFGISDTSLEEIFLK
VTADGEEAAANAKTPEQWMLLKRTKSCSKVGVEEGEPEEANGLKQANGGGNHDDDSAGKG
SSQVKGADLVMKQFLALLVKRFHHATRSYKDFLAQIVLPASFVLIALIFTMIVPPFGEYP
PLILTPWMYGKQLTFFSNERLENNQMRHFTKVLLNPPGLGTRCMAGSPLQNLPCENETLG
WETPAVSSIANNILQSPEWHPLNPSPSCQCSTNKKLTMLPICPIGAGGLPPMQRKEATGD
ILLDLTDRNITDYLVKTYPSLIRQSLKSKYWVNEQRYGGLSVGGQLPILEVSPKQIQDTL
SQLMKMLNVTGGPYTKKSLQEIGPFLRYMESEYNVKVWYNNKGWHAMVAFMNVANNAILR
AHLPRNVDPMQYGITAINHPLNLTKEQLSEVTVLKTSVDAVTAICVIFAMSFIPASFVLY
LIQERVTKAKHLQFVSGVSPLVYWLANFFWDMMNYSLSTAMVVGIFVAFDKKCYTSPTNL
PALVLLLFLYGWSVTPMMYPMSYIFNIPSTAYVSLSCINLFIGINSSALTFILELFENNR
ALLEFNEWLKKGLLVFPHFCLGRGLIDMAMNQAVTDVYAHFGEDRAMDPFKWDFVGKNLV
FMAIEGCVYFLFTILIEYRFFLDHWLSDFRGPPPKDEDEDVAAERERIYNGGNKSDILQI
RDLCKTYSGKTRQAVDRICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVSSGEATVSG
YSILSDMLDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPESDISRVADWGIQKLGL
SEYAGRCAGTYSGGNKRKLSTAIAMIGCPALVLLDGTHYRYGPPLQTVPVDCHYECHPGR
KGCGFDITQHGGV
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaggaagtcagattcgccttctgctgtggaagaattggactctacgcaagaga
cagaagatccgcttcctggtggagattctgtggccggtggttctgttcattggtctggtg
tggttgaggaaagccaaccccctttacaaacaacatgaatgtcacttccccaacaaggcc
atgccttccacaggtatcatcccatggatccagggtatcttctgtaacgccaacaacccc
tgcttcaaacactctaccnagggcagaggccctggggtcgtctccaactacaacaactgc
atactggcgcggttctgggctgactccaatgagctgttgttcgacgacccagagttccag
cagttgggtcggctgtgggaggacatggccgtcatgaacaacttcatggacaccatctgt
aacacaccagaacagatagccggtcgaggtctgaagatagaggatatcctgaaggatgat
gagatgttgacagccttcctgctgagagacgttggcctgtcagagtctgtggttcatcag
ctggtcaacgctcaagtccgtccagaacagtttgcccatggtgttccagacctccacttg
aaggacatcgcctgcagccaggctcttctggagaggtttatcatcttccccagccggaga
ggcatgtacggagtacggaacgctatgtgtgccctgacacagcagcgcctgcagaagata
gaggacatgctttatgctaacgttgacttcttcaagatcttcagactgctgccccgggtg
ttggacaaccacacggacggaccagacctacgatactgggggcgtgttctaaccgctgta
tcagagaaggtccaagtgctctttgagagaaacagcaccaaggaccttctgaagatagtc
tatccgttgttccgggctggtggtccaagctcctttagccagctgatgagcattgtgtct
gccctgttctgtgggtacccagacggagagggatccagggtcctctccttcaactggtac
gaagacaacaactacaaggtgttcctgggggtgaatggatccaagaaccacgactatgtc
tacgacatgacaaccactccgttctgtaacgacctgatgcagactctggagtctaacccg
gtcactaagatcgtctggagttcagtcaagcctctcttcatggggaagatcctctacgct
ccagactccccagccatcagactgatactaaagagtgccaacactacgtttgaggagctg
gagcgtctgatgaccatgggaaaggcctgggaggaggtgggacctcaaatctggaggttc
ttcaacgctggcctacagataaacatgatcagggacaccatcagaaaccccacggtagca
gacctaatcgacaggagtatggaggacactgagttctcctctaaagacatcctcaacttc
ctgtacaacgggcttgaggaggacagagaagagaccatgcccagcttcgactggaggaac
gtcttcaacctcacagaccaggccgtccgcatgttcaaccagtacggagagtgtatcagt
ttggataagttcaaaccccatacagacgaggatcagctgacccaccaggctctctttcta
ttggaggagaataagttctgggcagggctagtcttcctggatgtctacccctggaccact
accgtgccgcgtcacgtcaagtacaagatacgcatggacatcgaccaagtggagagaacc
aacaagatcaaagacaggtattgggaccctggtcccagagcagaccctatggaggatctg
aggtatatctggggtggctttgcctatctccaggacatggtagagcatggcatactgaag
atacagacgggacacgactggcccctgggagtctacgtacaacagatgccatacccctgc
tatgtagacgacctcttcatgttgactctgaaccggtgcttccctatcttcatggtgcta
gcgtggatctactctgtgtctatgacggtgaagagcatcgttctggagaaggagctacgc
ctcaaagagacactcaaggccatgggagtgaccaacggagtgatctggtacacctggttt
atagacagcttcatcatgatgaccgccagcacagccctgctcacactgattattatggct
ggtaaggtgttgaactactccaacccgctggtagtgttcctgttcctcctgacgttcacc
atgaccaccatcatgcagtgtttcctactcagtgtgttcttcaacaaggccaacctggct
gcagcctgcagcggtatcatctacttcaccctctacctgccccacatcctctgtgtggcc
tggcaggaccgcatcaccaagaacgccaagatcacagcgagtctgctgtccccagtagcg
tttggttttgggacggagtacctgtctcgttatgaggagcagggcctgggtctgcagtgg
gacaacattggcaccagtccactagagggcgatgcctactccttcttcacctccataggc
atgatgatgtttgacgccgtgctctatggcttcctggcatggtaccttgacaacgtcttc
ccaggtcagtatgggattggacgaccattctacttcccattccagccctcctattggcaa
aggtctgaacccgccctctccaacattccagactcagatccagagatgcccgacgtggac
aaggacgtagacagtatgtgttcacctaggaggtgtaatggcgtgggggtaaagaaaccc
tgcaaacaccaggacaagagagagaggatggagagagagagggaggagctgctgaaacga
caggaagaagaacagaacaaggagaagcaggaagaggacctgacaggtcagttgttcttt
gagccggagccagcagggctgaccgtgggggtagagattcaggacttggtcaaggtgttt
cctgggggatcccgtccggccgtggatcacctcagcatcgccttctacgagggccagatc
acatcgttcctaggacacaacggagccgggaaaaccaccactatgtctatcctgactggt
ctgttccctcctacatctgggacagcctttatcaacgggaaagacatcaggactgacatg
gacagtatccgcacatccatgggcatgtgtccccagtacaatatcctcttcaaacatctg
acggtggaggaacacatcctgttctactccatgctgaagggcacctctcaggctgaggct
caacaggcggtcgaggtcatgctggaggacctgggcctgcctcataagagagacgaggag
gcacagaacctctcagggggtatgcagaggaagctgtctgttgccatggcatttgttggg
gggtcaaagattgtgatcctggatgagcccacgtcgggggtcgacccttactccagacgg
tccatctgggacctgctactcaaataccgcacaggccgtacagtgatcctgtccactcac
cacatggacgaggctgacctgttgagtgaccgtgtcgccatcatctctaagggccagctc
cattgctgtggctcccccctcttcctcaagaactgcttcggggtgggattctacctcacc
ctggtccgacgcatgaaggacgtgaggaaaaaagagaatgagtgtgactgtgcctcagag
tgttcctgtacctgttccacctgcaccaaggtgaaagaggaatcccagggccagtcccag
cagctggagagagctctggatggtgacgtggacaacatcaccacgctgatccatcaccac
gtcccagaagccaagctgatcgaggccatcggccaggagctgaccttcctgctgcccaac
aagggtttcaagcaccgggcctacgcctccctcttcagagaactagaggaaacactggga
gacatgggcctcagcagcttcggcatctctgacacctcactggaggagatctttctgaag
gtgacagcagatggggaagaagcagcagccaatgccaaaactccagaacagtggatgttg
ctgaagagaaccaaaagctgcagtaaagttggtgtggaggagggtgaacctgaagaggct
aacggtctgaagcaggccaacggtgggggtaaccatgacgacgacagcgcagggaaaggg
tcgagtcaggtcaaaggagccgatctggtcatgaagcagtttctggccctgctggtcaag
aggtttcaccatgctaccagatcatacaaagacttcctcgcacagatcgtcctgcctgct
agcttcgtcctgatagccctgatcttcaccatgatcgtgcctccgttcggagagtacccc
cccctcatcctcactccctggatgtatggaaagcagctaactttcttcagtaacgagcga
ctggaaaacaaccagatgagacatttcaccaaggtgttgctgaacccccctggccttggc
actcgctgtatggcaggaagccctctacaaaacctgccctgtgagaacgagacattgggc
tgggagacacctgcggtttcttcaatagccaataacatcctgcagagccctgagtggcac
ccgctaaacccctccccttcctgccagtgcagcaccaataagaagctgactatgttaccc
atctgtccaatcggagctggggggctgccccctatgcagaggaaagaggctacgggagat
atactactggacctgactgatagaaacattacagactacctggttaaaacctaccccagc
ctcatcagacaaagtttgaagagcaaatactgggtgaatgaacaaaggtatggaggtctg
tctgttggaggtcagctgcccatactggaagtcagccctaaacagatccaggataccctc
tctcaactgatgaagatgctcaacgtcactgggggtccctacacaaaaaaatcgctgcag
gagatcggacctttcctcagatacatggaaagtgaatacaatgtcaaagtctggtacaac
aacaaaggctggcatgccatggtggccttcatgaatgtggccaacaacgccattctgagg
gctcacctgcctcgtaacgttgaccccatgcagtacggcatcacagccatcaaccacccc
ctcaacctcaccaaggaacagctgtctgaagtcactgtgttgaagacatcagtagatgcc
gtgacagctatctgtgtgatctttgccatgtccttcatcccagcctcgtttgtcctctac
ctgatccaggagagagtaactaaggccaaacacctccagttcgtcagcggggtcagcccc
cttgtctactggttagccaacttcttctgggatatgatgaactactctctcagtacagcc
atggtggtggggatctttgtggccttcgacaagaagtgttacacctcacccaccaacctg
ccagccctcgttctcctgctcttcctgtatgggtggtcagtaacccccatgatgtacccc
atgtcatacatctttaacatccccagtacagcctacgtctctctgtcctgcatcaacctg
ttcatcggcatcaacagcagcgccctcaccttcatattggaactgttcgagaacaaccgg
gccttgttagagttcaatgagtggctgaagaaaggcctcctggtcttccctcacttctgt
ctgggccgggggctgattgacatggctatgaaccaggcggtgactgatgtctatgcacac
tttggtgaggaccgtgccatggatccgttcaaatgggactttgtagggaagaacctggtc
ttcatggctatagagggatgtgtctatttcctcttcactatcctcatagagtaccgcttc
ttcctcgaccactggttatcagacttccgagggccccctcctaaagatgaggacgaggac
gtggcggcggagagagagaggatctataacggcgggaacaagagtgacatcctccagatc
agagacctctgcaagacgtactctgggaagacgagacaagcggtggacaggatctgtgtg
ggcgtgcctgcaggagagtgtttcggtctgttaggagtgaacggagccgggaaaacaacc
acctttaagatgttgactggagacacagacgttagttctggagaggccactgtctctgga
tacagtatcctgtcggacatgttggacgtgcaccagaacatgggctactgccctcagttt
gacgctatagacgacctgctgacaggcagggaacatctttacctctacgctcgtctccga
ggggtccccgagtcagacatcagcagagtggcagattggggcatccagaagctgggtcta
tcagagtacgctggtcgctgtgcaggaacatacagcggaggcaacaagaggaaactctcc
acagccatcgctatgattggctgcccagccctggttctactggatggaacccactacagg
tatggacccccactccagacggttcctgtggactgccattatgagtgtcatccaggacgg
aagggctgtggttttgacatcacacagcatggaggagtgtga
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integrated database retrieval system
