Oncorhynchus kisutch (coho salmon): 109884513
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Entry
109884513 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109884513
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109884513
04082 Neuroactive ligand signaling
109884513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109884513
Ion channels [BR:
oki04040
]
Ligand-gated channels
Glutamate (ionotropic)
109884513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
109884513
NCBI-ProteinID:
XP_031688029
Ensembl:
ENSOKIG00005004150
LinkDB
All DBs
Position
LG1:complement(72292593..72417931)
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AA seq
1813 aa
AA seq
DB search
MYKVLHLHSSTMLVSLLSPSPLQDRRVTSSFPPPPPEHSSSPHQQPRLALPSLSLPLSLS
LLLLSLFLLPICESARSPGRGGAGQGGGAPGGAPGTGGAGGEKGGQRGTNLIPPHYSPYY
PPVSPARPPVPLPPKVASSLSIAVILVGNSSEVSSTYVEKEEFLHVPHPTKVQLETMNDT
DPKSIINRICTLMTNTWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAA
KDDHSMFFQFGPSIEQQASIMLKIMEEYDWYIFSIVTTYYPGYQDFVNKIRSTIENSFVG
WELEEVLLLDMSVDDGDAKIQNQMKKLQSPVYLLYCTKEEAYTIFEVANSVGLTGYGYTW
IVPSLVAGDADNVPAVFPTGLISVSYDEWDYSLEARVRDAVAVIAMATSTMMLDRGQHTL
LKSGCNETPNKKGSKQSNSNEVLKYLMNVTFEGRNLSFSEDGYQMHPKLVITLLDKQRRW
DKVGKWENSSLSMKYHVWPRFELFSDGEAREDDHLSIVTLEEAPFVIVEDVDPLSGTCMR
NTVPCRKQLKILNQTVPGQYTKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHGKKING
TWNGMVGEVEQKKAHMAVGSLTINAERSEVIDFSVPFIETGISVLVSRSNGTVSPSAFLE
PFSADVWVMMFVMLLLVSAIAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGL
VFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDNKFQ
KPNAFSPPFRFGTVPNGSTERNIRNNYPEMHQYMTSFHQKNVNEALASLKGGKLDAFIYD
AAVLNYMAGRDEGCKLVTIGSGKVFATTGYGIAIQKDSGWKRAVDLAILMLFGDGEMEEL
EALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHAFYWQLRFCFMG
YCTGKPGFTFSISRGIWSCIHGVQIEENKSAMDSPSATMNMNMNNTHSNILRLLRTAKDM
TAIPGVNGSPHTHGALEYGGHHRGESPSIYDVSEHRRSLQERKAPPPPYLPEDNMFSDYI
SEVERTFGNLPLKDNNLYQDHYLHHHSGPGPGLALGMSGPPPNRPSSLGSTSSLEGGMFD
CDSLGGGVAPIFTTQPRVASLTHRNTNKFDLIAGHASASGSGQQGGQFKSNDLYGRFSFK
GGASSSGFIDRGGHDRYCMGGGGGGGGGSGGDDVSDISSHTITYGNLEGNAKRRKQYRDS
LKKRPASAKSRREQDEIDYRRRAHHHHTVHHHFSRGPLGHRSASPPLVPSERKRGGGGGG
GNSSPYLFRDKENLREFYAEQVLSKEGSAKWEHVDVADGPCPMGGRGGVAGGSSGSGICK
SLVPVEDFLKGNKPKKSEGKSGVVGGMGLGTSGQQAHTCWEKNMSEVGGGGIAGGDWECR
NHSGGGGGGGGGGGASAGGGNSRPSSATCKRCESCKKPGNLYDISEDNLIFSQMGGGGGK
SGDAGGAGQSQSHAQRRKLGPGGRVLRRQHSYDTFVDLQKGGGGGRMGGGGGGGGGGGGG
GGQLLPPRSVSLKDKDRYMEGVSPYAQMFAQYAERDRDSPSFFSRGGSERERAKGGSSFN
LFRGERGEGGLHRRSVGEKDMRDRDRRMMGGGGGGGGSGKWAGTYSLSKSLYPDKVTQNP
FIPTFGDDQCLLHGGKPYYVKMSPQQQQQPPQHLLNNSRGDFRGSMGVPSYFPASATTGV
MSNVTPRFPNDLCLGGGLGGPMGNHHGPRLGGNKLLPVRDGGLGLVGQGGQTPFNGSSNG
HVYEKLSSIESDV
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggtactgcatttacactcctccacgatgcttgtcagcctcctctccccctcc
ccactccaggacaggcgcgtcacctcctccttcccccctcctcctcccgaacacagctct
tcccctcatcagcaacctcgcctggcccttccctccctctccctccctctctccctctct
ctcctcctcctctccctattccttctgcccatctgcgagtcggcgcggtcgcctgggagg
ggcggagctggccagggcggaggagcaccaggaggtgcacccgggacgggaggagcagga
ggcgagaaaggaggccagaggggcacaaacctcatcccccctcactactccccttactac
cccccagtatcccccgcccggccccctgtgcccttacctcccaaagtggcctcctctctt
agcatcgccgtcatcctggtgggaaactctagcgaggtgtcgtccacctacgtggagaaa
gaggagttcctccatgttccccaccctaccaaagtccaactggagaccatgaacgacacg
gaccccaagagtatcatcaaccgcatctgcaccctgatgaccaacacctggctgcagggg
gtggtgttcggggacgacacggaccaggaggccatcgcccagatcctggacttcatctct
gcccagacacacatccccatcctgggcatccgaggaggctcctccatggtcatggctgcc
aaggacgaccactccatgttcttccagtttggcccgtccatagagcagcaggcctccatc
atgctgaagatcatggaggaatacgactggtacatcttctccatcgtcacaacctactac
cccggataccaggactttgtcaacaaaatccggagcaccatagagaacagttttgtgggc
tgggagctagaagaagtcctcctgttggacatgtctgtggatgacggagacgctaagatt
cagaaccagatgaagaagctgcagagtcctgtctacctgctttactgcaccaaggaggag
gcctacaccatctttgaggtggcaaactctgtgggactgacgggatacggctacacctgg
atcgtaccgtcgctagtggccggcgacgccgataatgtccccgccgtgtttcccacaggg
cttatttcggtgtcgtatgacgaatgggactacagtttagaggctcgggtgcgggatgca
gtggctgtcatcgccatggcgacctccaccatgatgctggaccgggggcaacacacgctg
ctcaagtcaggctgcaacgagacccctaacaagaagggctccaaacaaagcaactccaat
gaagtgctcaagtatctgatgaacgtgacgttcgagggacgtaacctgtcgttcagtgag
gatggataccagatgcatcccaaactggtcatcaccctgctagacaagcagagacgctgg
gacaaggtgggtaagtgggagaacagctccctgtccatgaagtaccatgtgtggcccagg
ttcgagctgttctccgatggggaggcccgggaggacgaccacctgtccatcgtgacgctg
gaggaggctccctttgtcatcgtggaggacgtggaccccctcagtggcacctgcatgagg
aacacagtgccatgcaggaaacagcttaaaatactcaaccagacagtacctggccagtac
accaagcgctgctgtaaaggtttctgcatcgacatcctgaagaagatcgccaagcaggtc
aagttcacctatgacctctacctggtcaccaacggaaagcacggcaagaagatcaacggc
acctggaatggaatggtcggggaggtggagcagaagaaggcccacatggccgtggggtcg
ctcaccatcaacgcggagaggtccgaggtcattgacttctccgtgcccttcatcgagacg
gggatcagtgtcctggtctcccgtagcaacggcactgtctccccctccgccttccttgag
ccgttcagtgcggacgtgtgggtgatgatgtttgtgatgctgctacttgtgtcggcaatt
gctgtgtttgtgtttgagtacttcagcccggtcggctacaaccgctgcctggcagacgga
cgagagcctggtggcccctccttcaccatcggcaaggccatctggctgctgtggggcctg
gttttcaacaactctgttcccgtccagaaccctaaaggcaccaccagtaagatcatggtg
tcggtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggctgcc
ttcatgatccaggaggagtatgtggatcaggtgtcgggcctcagtgacaataagttccaa
aaacccaacgccttctccccgccattccgtttcggaacggtgcccaacggaagcacggaa
cggaacatccgcaacaattacccggagatgcaccagtatatgaccagcttccaccagaag
aacgtgaacgaggccctggcaagcctcaagggaggtaaattggatgccttcatctacgat
gctgctgtgttgaactacatggccgggagggacgagggctgtaaactggtgaccatcggc
agcgggaaggtgttcgccaccaccggttacggcatcgccatccagaaggactctggctgg
aagagagcagtggacctggccatcctcatgctgttcggcgatggagagatggaggagctg
gaggctctgtggctgacggggatctgccacaacgagaagaacgaggtgatgagcagccag
ctggacgtggacaacatggcaggtgtcttctacatgctgggggcggccatggctctgtcg
ctcatcaccttcattgccgagcacgccttctactggcaactgcgcttctgcttcatgggc
tactgcaccggcaagccaggctttaccttctccatcagcaggggcatctggagttgtatc
cacggggtccagatcgaggagaacaagtcggccatggactctccatcggccaccatgaac
atgaacatgaacaacacccactccaacatcctgcgactgctccgcacagccaaggacatg
accgccatcccgggggtcaacggctcgccgcacacacatggcgccctggaatacggtggc
caccaccgtggcgagtcgcccagcatctacgacgtctccgagcaccggcgcagcttgcaa
gagcgcaaggccccgccgccgccctacctgcctgaggacaacatgttcagcgactacatc
agcgaggtggagaggacttttggcaacttgcccctgaaggacaacaacctgtaccaggac
cattacctgcaccaccactcaggtccgggacctgggctggctctgggtatgtccggcccc
ccgcctaacaggccgagtagcttaggcagtaccagttcattggagggagggatgtttgat
tgtgacagtttagggggaggggtagctcccatattcaccacacagccccgcgttgcctcc
ctgactcacaggaacaccaataagtttgacctgatcgccggccacgcctcggcctcaggc
tctggtcagcaggggggtcagttcaagtcgaacgacctctacgggaggttctccttcaaa
ggcggggcgtccagttctggctttatcgacaggggtggtcacgacagatactgcatgggt
ggaggaggagggggtggcgggggctcggggggcgatgatgtgtcggatatctcctcacac
accatcacctacggcaatctggagggcaacgccaagaggcgtaaacagtacagggacagc
ttgaaaaagaggcccgcctcagccaaatccagacgggagcaggacgagattgattaccgg
aggcgagcccaccaccatcacaccgtccaccaccacttctcccgcgggcccctgggacac
cgctcggcctccccacccctggtcccctctgagcggaagagaggaggtggaggaggaggg
ggtaactcttcaccttacttattccgcgacaaagaaaatctgagggagttctatgcagag
caggtcctttccaaggagggctctgccaagtgggagcatgtggatgtggccgacgggcct
tgtccgatgggcggtaggggaggagtcgctggcggtagtagtggtagtggcatttgtaag
agcctagtgcctgtggaggatttcctgaaaggtaacaaacccaagaagtcagagggtaaa
agtggcgtagtcggaggaatgggcttggggacgtcagggcaacaggcccacacgtgttgg
gagaagaacatgtctgaagtggggggtggaggcatagcagggggtgactgggagtgtcgg
aatcacagtggtggtggtggcgggggaggagggggtgggggcgctagtgctggaggggga
aatagtcgtccaagctctgctacttgcaaacggtgcgagtcgtgtaagaaaccaggcaac
ctgtatgacatcagtgaagataacctcatatttagccagatggggggtggaggggggaag
agtggtgacgcggggggtgctggccaatcacaaagtcatgcacagcgcaggaagctaggg
ccaggtgggcgggtgttacggagacaacactcctacgacacgtttgtggatttgcagaag
ggtgggggtggcggacgcatgggcgggggtggaggaggaggtggaggaggaggaggggga
ggggggcagctcctcccacccagaagtgtgagcttgaaagacaaagaccgctacatggag
ggagttagcccgtacgcccaaatgtttgcccagtacgcggagagggacagagatagtccc
tcctttttcagtcggggaggtagtgagcgggagagggcgaaaggaggctcctccttcaat
ttgttccgaggcgaacgaggagaaggtgggttgcaccgtcggtcggtgggggagaaagac
atgagggacagggatagaagaatgatgggaggtggaggtggtggtggcggtagtggcaaa
tgggccgggacttactccttgtctaaatctctctacccagataaggtgacccagaacccc
ttcatcccaaccttcggcgacgaccagtgtctattacatggcggcaaaccgtactacgtc
aaaatgtctccacagcaacagcaacaaccgccacagcatctcctcaacaacagccgcggg
gacttccgaggctccatgggggtgccttcatattttccggcgtcagccacgacgggggtc
atgtccaacgtgacccccaggttccccaatgatctgtgtctcgggggagggttggggggc
cccatggggaaccaccatggccccagactgggaggcaacaagctactgccggtcagggac
ggggggttagggttggtggggcagggcggccagacacccttcaatggctcgagcaacggc
cacgtttacgagaagctctccagcatcgagtctgacgtctga
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integrated database retrieval system
