Oncorhynchus kisutch (coho salmon): 109884647
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Entry
109884647 CDS
T09179
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109884647
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109884647
Membrane trafficking [BR:
oki04131
]
Protein recycling
Others
Others
109884647
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109884647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17-31_F2_FERM
PDZ_2
SNX17_FERM_C
USP7_C2
Sina_TRAF
DarA_N
Motif
Other DBs
NCBI-GeneID:
109884647
NCBI-ProteinID:
XP_031643276
Ensembl:
ENSOKIG00005043176
UniProt:
A0A8C7KA21
LinkDB
All DBs
Position
LG13:complement(75770374..75807800)
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AA seq
570 aa
AA seq
DB search
MADIEGEGINSVAPPLVQPPSRNCSGVSPTQGTGSCQTVTTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNSVNVEGATHK
QVVDLIRAGERELMLAVLSVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPTYKHAEL
NQERFVVYNVYMAGRQLCSKRYREFAILNQNLKREFANYTFPKIPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVFGESDVMQEFLSDESDENYNGVSDVELRIAMPDKTTVTVRVRKN
CTTDQVYQAVVMTVGMDSIAASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTC
LTLRKWLFTTEEEILLNDNQLAVSYCFHQAVDDVKRGFIKAEEKSYQLQKLAEQKKMAMY
LSMLRGCEGYNEIIFPHCSCDSRRKGHVVTAISIHHFKLHACTEEGTLENQVIVFEWVEM
QHWDTDEEGMAFCFQYARAEKKPRWVKIFTPYFNYLHECVERVFCELKWRKEVEEEAVDK
DNKNCSKEEYLPAVETQKEWRHLGGEIITS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcagacattgagggagagggaattaattcggtggcacctccgttagttcagccaccc
tctcgtaactgctccggtgtcagcccaacgcagggcaccggcagttgccaaacggtgact
accgttacgtcaggcccgcgactggtgcggatagtcaagtctgactcgggatatggcttc
aatgtccggggacaggttagcgaaggaggacaactacggagcatcaacggggaattgtat
gccccgctacagcatgttagtgctgttttaccgggaggtgcagcggacagagccggtatc
tcgaaaggggaccggattctggaagttaatagtgtgaacgtggagggggcgacccataag
caggtggtggatctgatccgtgcgggggagagggagctgatgctggccgtgctgtctgta
cctccccaggaggctgactgtctggaccctggagacgacggctcagcccagtcctgctac
gactacagcgacaaacaggccgtccccatctccgtccccacatacaaacacgctgaactc
aaccaggagaggtttgtggtgtataatgtgtacatggcaggcagacagctgtgctctaag
aggtacagggagtttgctatcctcaaccagaacctgaagagagagtttgccaactacacc
ttccccaaaatacctggcaaatggcctttttccctgtctgaacaacaactagacgctaga
cgcaggggactggaggaatacctggagaaagtgtgttcagtgagggtgtttggggagagt
gatgtcatgcaggagtttctgtctgacgagtctgatgagaactataacggcgtatcagat
gtggagttgaggatagccatgcctgataaaaccaccgtcacagtccgagtccgcaagaac
tgtacaactgaccaggtctaccaggctgtggtcatgacagtaggaatggacagcatagcg
gccagctactttgctctgtttgaggtcatcaaccactcctttgtgcgtaaactggctcct
aatgagttcccccacaagctgtatgttcagaactacacgtctgctgtccctgggacctgc
ctcaccctgcgcaagtggctcttcaccaccgaggaggagatactgctcaatgacaaccaa
ctggccgtcagctactgcttccaccaggcggtggatgatgtgaaaaggggatttatcaag
gcagaggagaagtcctaccagctacagaaattagcagaacagaagaagatggccatgtat
ctcagtatgttacggggctgtgaaggctacaatgagatcatcttcccacactgctcctgt
gactcccgacgcaaaggccacgtcgtcacagccatcagcatacaccactttaaactgcac
gcctgcacagaagagggaacgttagagaaccaggtgatcgtgtttgagtgggtggagatg
cagcactgggacactgatgaggagggcatggccttctgcttccagtacgccagggcagag
aagaaacctcgctgggtcaagatctttactccctacttcaactacctgcatgagtgcgtt
gagagagtcttctgtgaactcaagtggaggaaagaggtggaagaggaggctgtggataag
gacaataagaactgcagtaaagaagaatatcttccagctgttgagacacagaaggaatgg
aggcacctaggaggagagatcatcacctcctaa
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integrated database retrieval system
