Oncorhynchus kisutch (coho salmon): 109884967
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Entry
109884967 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
oki04980
Cobalamin transport and metabolism
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109884967
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
109884967
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109884967
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109884967
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109884967
03029 Mitochondrial biogenesis [BR:
oki03029
]
109884967
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109884967
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
109884967
HMT complexes
COMPASS/SET1 complex
109884967
MLL-HCF complex
109884967
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109884967
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
109884967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
109884967
NCBI-ProteinID:
XP_031650723
LinkDB
All DBs
Position
LG17:complement(85529291..85611093)
Genome browser
AA seq
1840 aa
AA seq
DB search
MTSGTSGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTA
TNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKP
KSPKNGPPPCPRLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVV
GWDIPITYGVLPPPRESHTAVVYTEKTSSKSRLVIYGGMSGCRLGDLWTLDIDTLTWNKP
SINGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMA
WESVLMDSLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPR
PPSRVQLVRANTSSLEVSWGAVPTADTYLLQLQKYDIPPAPAATTPGVSPATSLPVNSPK
SPVTASAASPQGLPLQGITLVPSPTTTMPGSPLAAANARGPAILKVSAPHSTTGTSIVTV
RQANQGGKSPVTVTSLPAGVRMVVPAQGAQGTPMGSSPQMSGMAALAAAAAATQKIPPST
ATMQLPAGATMVKTVAMSPGSQTVKVASPVMVSNPATRMLKTAAAQVGTSGVVTPGTPSR
PIITVHKSGTVTVAQQHQVVTTVVGGVTKTITLVKSPLTMGGGGTLLSNLSNLGKVMSVV
QTKPGQTGTVTGQAGSSLQHIIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGTAGGKP
TILSYSGMPTTTKPGTHIIKTIPMSAIGQAGVTGSGMKSPITIITTKMMTPGTGTPGKII
SAMPRAGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPVTVSGVKPNVTTLVVKGT
TGMTTFGTVTGTVSSSLAGGSVATATPITTLGTMTTLPGQVTVSAAQAGAQPTQVTLITT
PSGVDAQPVHDLPVSILSSPTSADPSSTQPEAGDPGTVTLVCSNPPCETHETGTTNTATT
ASANMTGNGGVERVCSNPPCETHETGTTNTQTTASSNMGQVQQVCTNPPSETHDTGTTNT
QTTASCNMGSNQQQQGSCVTNNASGSDPPSSPPPPSSSGDLSPSSVSGTSSVPGVLRPET
LRTGTTYTSTTARSNMGSDQMGMTLSSSSSDNQSKSSSGGGGSPLTSPVCSNPPCETHET
GTTTTSTQTTGTVQRVCSNPPCETHETGTTNTPSQTTSNLTGTGTVQRVCSNPPCETHET
GTTNTPSQTTSNLTGTGTVQRVCSNPPCETHETGTTNTATTAQPGDSTQGDNGTTEAPSS
SSVTTESSAVVAAGRAVTTVTQSTPTPGPSVPEISSMSGSSEAMVAACIEGEEAMQTDCL
PEGTVRVVTLEEAAAAGIQVHVEGMEEQNQGEQEGLPAELMSEGDAGGQQTLMVTGLTPE
ELAVTAAAEEAAQHAAAEEANAQAMAIQAVLQAAQHAVMNEGDGGQEGQHQTTTIPIVLT
QAELAALVHQQQQLQEAQALAQAAAAAAAAQHNQPTEGLAPADSLNDPASESNGQELAAA
VTQAVARLAPTCTMVVTNPAKTQPMMVATPAKTQPMMVASLAKTQPMLVATPAKTQPMMV
ASPAKTQPMMVAAPAKTQPMMVASLAKTQPMMVASPAKTQPMMVASPAKMQAAATLADVA
NGIESAAGRQGAPPAVAKAPVKKDNQWFDVGIVKVTNTVVTHYYLPTDDQATVDDDSGAI
PDYSQMKKMDLQPGTAYKFRVAGINTCGRGNFSEVSAFKTCLPGFPGAPCAIKISKSPDG
AHLTWEPPSVTSGKIIEYSVYLAIQSAQSGEQAKPTTTTTPAQLAFMRVFCGPNPSCLVQ
SSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLKR
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgggacctctggctcagttctgcagccacggtggaagcgggtgttgggttgg
tccggccctgtccctcggccccgacacggacatcgtgcagttgcaattaaagaattgatg
gtcgttttcgggggtggcaatgaaggaattgtggatgaactgcatgtgtataacacagcc
accaatcagtggttcattcctgctgtccgtggcgacatcccgcctggctgtgctgcgtat
gggttcgtgtgtgacggcaccaggctgctggtgttcggggggatggtggagtatggcaaa
tacagcaacgatctgtatgaactacaggccagtcgctgggagtggaagcgtctgaagccc
aagtctcctaagaacggccctcctccctgtccccgcctgggacacagcttctccctggta
gggaacaaatgcttcctgttcggaggactggctaacgacagtgaggaccccaagaacaac
atccccagatacctgaacgatctgtatacgttggagctgcgtgccggctccagtgtggtg
ggctgggacatccccatcacctacggggtgttgcccccgcccagagagagccacaccgcc
gtcgtctacacagagaagacctctagcaagtcccgtctggtcatctatgggggtatgagc
ggctgtcgactgggggatttgtggacactagatatagacaccctgacatggaataaaccg
tccatcaacgggacagctcctcttccccgcagtctccactctgccacaaccatcaccaac
aagatgttcgtgttcggaggctgggttcccctggtgatggatgacgtcaaagtagcgaca
cacgagaaggagtggaagtgcactaacacactggcctgtctcaacctagactcgatggcg
tgggagtcggtgctgatggattctctagaagataacatccccagggccagggccggtcac
tgctccgtggccatcaactcgcgcctctacgtctggagcggacgggacggataccgcaag
gcctggaacaaccaggtgtgctgtaaggacctctggtacctggagacagagaagccccgc
cccccgtcacgggtgcagctggtgagagccaacaccagcagcctggaggtgagctggggg
gcggtacctactgcagacacctacctgttacagctgcagaagtacgatatcccccccgcc
ccggccgccaccacgcccggcgtcagccccgcgacgtcactaccggtcaactcccccaag
agccctgtcacagcctctgcagcgtccccccagggcctgcctctccagggcataacgctg
gtcccctcccccaccaccacaatgcctggaagtccactggctgctgcgaatgcacgcggg
ccagctatcctgaaggtgtctgctccccattccaccacaggcacctccatcgtcacggtg
aggcaggctaaccagggcgggaaatctcccgtgacggtgacgtcacttcctgccggggtc
cgcatggtggtgccggcccagggtgcacagggaacgccaatgggcagcagccctcagatg
agtggcatggctgcgttggctgcagcggctgctgccacacagaagatcccgccctccacg
gccaccatgcagcttccagctggtgctactatggtcaagaccgtggccatgagccccggt
tcacagactgtcaaagtagcctcgcctgttatggttagtaacccagcaacccgcatgctg
aagactgctgcggctcaggtgggcacgtcaggtgttgtcacacccggaacgccttctcgc
cctatcatcaccgtgcacaagtctggcacggtgacggttgcccagcaacaccaggtggtt
accacggtagtgggaggagtcaccaagacaatcacccttgtcaagagtccccttactatg
gggggaggaggaacactgctgtctaacctttccaacctggggaaggtgatgtccgtggtc
cagaccaagcctggtcagacaggaacggtgacgggacaggctggctccagcctccagcac
atcattcagacgaaaggtcccctcccggcgggcaccatcctgaagctagtgacctcagcg
gacggcaagcccaccaccatcatcactacgtcccaggccgggaccgcggggggcaaaccc
accatcctatcctacagcggcatgcccaccaccaccaagcctggcacgcacatcatcaag
accatacccatgtctgccattggacaagcaggagtgacaggaagtggtatgaagtccccc
attaccattatcaccactaagatgatgacaccaggcaccgggacaccaggcaagatcatc
agcgcaatgcccagagctggggctggtcagcagggactcacacaggtggtgctgaagggt
gccccaggacagcccgggactattttacggaccgtccccatgggaggagtacgtctcgtc
tccccggttactgtttccggtgtcaaacctaacgtcaccacccttgttgtcaagggaacc
acaggtatgacaacgtttggtacggtgactggtacagtgtcttcgagcctggcgggagga
agtgttgccacggctactcccatcaccaccttgggcaccatgaccactctgcctggacag
gtcaccgtctccgcagctcaggcgggagctcagcccactcaggtgaccctcatcacgacc
cccagtggtgtggatgctcagcctgtccacgacctcccggtctccatcctgtcctccccc
acctccgccgacccctcgtccacccagcccgaggcaggcgacccaggaacggtaaccctg
gtctgctcaaaccccccctgcgagacccacgagaccggcactactaatacagctaccacg
gcctccgctaacatgactggtaatggtggggtggagagggtgtgttcaaacccgccgtgt
gaaacccacgagaccggcaccaccaacactcaaacgacagcgtcctccaacatgggccag
gtacagcaggtgtgcaccaacccgccgtcagagactcacgatacaggtaccaccaacacc
cagaccaccgccagctgtaacatgggatccaaccagcaacaacaaggctcctgcgtaacc
aacaacgccagcgggtctgatcccccgtcctctccgccccccccctcctcctccggagac
ctctccccctcgtctgtttctggtaccagctctgtgcccggggtgctacgaccggagact
ttgagaacagggaccacctacacctcgaccaccgcacgctctaacatgggctctgaccag
atgggcatgacgctcagctcctcgtcctccgataaccagagcaagtcatccagcggagga
ggaggatcccccctcacatctcctgtctgctccaatccaccttgtgaaacacacgagact
ggcactaccactacgtcgacgcagactacagggacagtgcagagggtgtgttccaatcct
ccgtgtgaaacccatgaaactgggacgaccaacaccccgtctcagactacgtccaacctg
acagggacgggcacggtccagagagtttgttccaatccgccgtgtgagacacacgagacc
ggaaccaccaacaccccgtctcagactacgtccaacctgacagggacgggcacggtccag
agagtgtgttccaatccaccgtgtgaaacacacgaaaccggaaccaccaacacggctact
acagcccagcctggtgactcgacacagggagacaacggaactacagaggctccctcgtcg
tcctcggttaccacagagtccagcgccgtggtggcggctggccgagcagttaccacggtt
acccagtccacacccacacctggaccctccgtacctgagatctcgtcgatgtctgggtcg
tctgaggcgatggtggcggcatgtatagagggagaggaggccatgcagacggactgtctc
ccagagggcacagtgagggtcgtgaccctggaagaggctgctgcagctgggatacaggtc
catgtggagggcatggaggaacagaaccagggggagcaggagggcctgcctgcggagctg
atgtctgaaggtgacgcggggggccagcagaccctgatggtgacgggtttaacccccgag
gagctggctgttaccgctgcagccgaggaggcggcacaacacgctgctgctgaggaggct
aacgcccaggccatggccatacaggctgtcctgcaggccgcacagcacgctgtcatgaat
gaaggagacggtggccaggagggccagcaccaaaccaccaccatccccattgtgttgact
caggctgagctggcagccctggtacatcaacaacaacagctgcaagaagcccaggctctg
gcccaggcagcagcggcggcagcagcagcacagcacaaccagcccaccgagggcctggcc
ccagcagacagcctgaacgacccggcgtcagagagtaacggccaggagctggctgcagca
gtgacccaggcggtggcccggctagccccaacctgcaccatggtggtgacaaacccggct
aagactcagcccatgatggtggccaccccggctaagactcagcccatgatggtggccagc
ctggctaagactcagcccatgttggtggccactccggctaagactcagcccatgatggtg
gccagcccggctaagactcagcccatgatggtggcagccccggctaagactcagcccatg
atggtggccagcctggctaagactcagcccatgatggtggccagcccggctaagactcag
cccatgatggtggccagtccggccaagatgcaggcagctgcgaccctggcagacgtggct
aacggcatagagtctgctgcagggagacaaggagctcctcctgcggtggccaaagccccg
gtgaagaaagacaaccagtggtttgatgttggcatcgtcaaggtgaccaacaccgtggtc
acacactactacttgcccactgacgaccaagccactgtcgatgatgactctggggcgatc
ccagactacagtcagatgaagaagatggatctccagccagggacggcctataaattcaga
gtggccgggatcaacacctgtggtcgagggaacttttcagaggtctcggccttcaagact
tgtctaccaggtttccctggagctccctgtgctatcaagatcagcaagagcccagacgga
gcccacctgacctgggagcctccgtcggtcacatctggtaagatcattgagtactcggtg
tacctggccatccagagcgcccagagcggggagcaggccaagcccaccaccaccaccacc
ccagcccagctggctttcatgcgggtgttctgtgggcccaacccttcctgcctggtgcag
tcgtccagcctctccaacgcacacatagactacaccaccaagcctgccatcatcttccgc
atcgcagcccgcaacgagaaaggttacggccctgccacgcaggtcaggtggctcaagagg
tag
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integrated database retrieval system
