Oncorhynchus kisutch (coho salmon): 109885077
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Entry
109885077 CDS
T09179
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03420
Nucleotide excision repair
oki04115
p53 signaling pathway
oki04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109885077 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
109885077 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
109885077 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109885077 (ddb2)
03400 DNA repair and recombination proteins [BR:
oki03400
]
109885077 (ddb2)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109885077 (ddb2)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109885077 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
109885077
NCBI-ProteinID:
XP_031688760
Ensembl:
ENSOKIG00005020530
LinkDB
All DBs
Position
LG10:complement(3574192..3615568)
Genome browser
AA seq
503 aa
AA seq
DB search
MARAKKGPSEASESKQKSRRQNGETSGAAGQTISMKLRQKMDGKNTLKTGPVFPTTMIRS
SVGKRSGPGSILHYIYQSTLGQSFHSQMRQCLQEPFVRSLSSFKLHRTASPFDRRVTCLE
WHPSHPSTLAVGSKGGDVVLWDYNVLNKTSFIQGKGAGDFIGGMTFSLTDPSKVYLASGD
GTLTEQSFQGGPGTVLSRVQDCGHDHHNVCLWYCCVDVSLSRQMLVTGDNIGRVLLLGMD
GHQVFNGKLHKAKVTHAEFNPRCDWLMATASVDHTVKLWDLRNIKDKNTYLHEMVHDKAV
NSAYFNPVDCSKLLTTDQYDQIRVYSSSDWSTPQQIIQHPHRQFQHLTPIKATWHPLYDL
MVVGRYPDERVCPGALRTIDIYDANTGELACQLLDPNAPGIISVNKFNPMGDVLGSGMGV
NILVWNRGETLAGKQQRGELQQEAGVQVGRGRGQRRRRGETRRGGGTGGQGREDEDDIGK
LKKKLSSSSGTRTRTSRDKEGSK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaaagaagggtccttcagaagcatctgaatcgaagcagaagtcgaggagg
cagaatggagaaacgtctggggctgcaggacaaaccatctccatgaagcttcggcagaag
atggacgggaagaacacactgaaaacagggcctgttttcccaaccaccatgatcagatct
tcagttgggaagagaagtggaccaggaagcatcctgcactacatttaccagagtacactg
gggcagagctttcattctcagatgagacagtgtctccaggagccgtttgtacgttccctg
tcctcctttaagctccaccgtacagccagtccgtttgaccggcgggtcacctgtctggag
tggcacccctcgcacccctccacgctggcggtcggctccaagggaggagacgtggtcctc
tgggactacaacgtgctcaacaagaccagcttcatacaagggaaaggagccggggatttt
attggagggatgacgtttagcctgacggacccgtccaaggtctacctggcgtctggcgac
ggtacgctgaccgagcagagctttcagggcggtccaggaacggttctgtccagagtccag
gactgtggacacgatcaccacaatgtctgtctgtggtactgctgtgtagatgtgtcgttg
agcagacagatgttggtgaccggagacaacatcggacgagtcttattgctaggcatggat
ggacaccaggtcttcaacgggaagctgcacaaagccaaagtgacccatgctgaattcaac
cctcgctgcgattggttaatggcgacagcgtccgttgaccacacggtgaagctatgggac
ctgaggaacatcaaggacaagaacacttacctccacgagatggttcatgacaaagctgtt
aactcagcctactttaatccagtggactgctccaagctcctgaccacggaccagtatgac
cagatcagggtgtactcctcttctgattggtcaactcctcagcagattatccagcaccca
cacagacagtttcagcacctcacaccaatcaaggccacgtggcaccctctgtacgacctg
atggtggttggacggtaccctgacgagagggtgtgtccaggtgccctgaggaccatcgat
atctatgatgccaacacaggagagctggcatgccaactactggaccccaacgcccctggc
atcatatctgtcaacaagttcaatccaatgggagatgttttaggatctgggatgggagtg
aacatcctagtgtggaacagaggggagacattggctggtaagcagcagagaggagagcta
caacaggaagcaggagtccaggttggcagaggtcgaggccagcggaggagaagaggggag
actcggagggggggagggacggggggacagggacgagaggatgaggacgacattgggaag
ctgaagaagaagctgtcttcgtcctcggggaccagaaccagaacatccagggacaaagaa
gggtccaaataa
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integrated database retrieval system
