Oncorhynchus kisutch (coho salmon): 109885100
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Entry
109885100 CDS
T09179
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109885100
03036 Chromosome and associated proteins [BR:
oki03036
]
109885100
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109885100
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
109885100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAB3A-like_C
Sec2p
CCDC39
Phage_scaffold
Borrelia_P83
MTR4_beta-barrel
Mis12
fvmX5
TcaA_2nd
AviRa
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
109885100
NCBI-ProteinID:
XP_031657186
Ensembl:
ENSOKIG00005036887
LinkDB
All DBs
Position
LG22:complement(55758975..55794989)
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AA seq
572 aa
AA seq
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MPAEVKVLPTTYTQGKKNQIEEGGRTQGLNYDLTKARTFTVTEVTVNCSWISGSAWNMDA
FEGLHSVQLSSSPPASACNPGYEVLVSAGSGVQVYSNATFYGKPSVLGHTQRRGRDKYPS
YREETKEERCEVGRLVDLEPGPSPRVDGGGPADPGFTRPQEGAVAQARSREGSRLEGATQ
LEVALGGEHEDNVSRLRSSSLEIREKGSEILREQLDAAQKELKLKDKECERLSQVRDQLE
QELEELTASLFEEAHKMVREANVKQAAAEKQLKEAQGKIDVLQAEVSALKTMVLTSTPSS
PNRQAHPQLLSPGTRSKGASPRHGGGHTRNKSASWALPLAPGGNLDSHSLQPVREDKEPT
VPALLSLILCLVPGHSISVTYEPYWAEKGEGPRSLSRQMDNVLYAEFLTWKDKPSLDRTS
AFLGRIYREDIGPCLSFTKSELSQSVQNAVENNSLTIEPVAVSALPMVKANAIECGGPNG
LRAAVETKCALSGMSRSCKHRIKLGDRESYYHISPSSRARITAVCNFFTYIRYIQQGLVR
HDAEQMFWEVTRLRREMTVAKLGFYLTDTDQG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaagtgaaggttcttcctacaacatacacacaaggaaagaaaaaccagatt
gaagaaggtggaagaactcagggccttaactatgatctcacgaaagccagaaccttcaca
gtaactgaagttacggtaaactgcagttggattagtggctctgcctggaacatggatgct
tttgagggtctccacagtgtccagctgtcctcctctccgcctgcctctgcctgcaaccct
gggtatgaagtactagtctcagctgggtctggtgtccaggtgtactccaacgctacgttc
tatggaaaacccagtgttctggggcatacacagcggagagggagagataaatatccctcc
taccgagaggagactaaagaggagaggtgtgaggttggaaggttggtagacctggagccc
ggtccgagcccccgggtggacggtggtgggccggctgacccaggtttcaccaggccccag
gagggagctgttgcccaggcccggagccgggagggcagcaggctggagggtgctacccag
ctggaggttgccctgggcggggagcatgaggacaacgtgtcccgcctccggagctcttcc
ctggagatcagagagaagggatcagagatcctacgggaacaactggatgctgcacagaag
gagctgaagctgaaggataaggagtgtgagcgtctgtcgcaggtcagagatcagctggag
caggagctggaagagctcactgccagtctatttgaggaagctcacaagatggtgcgggaa
gccaacgtgaaacaagctgcagcagagaagcagctgaaggaggctcagggcaagattgat
gtccttcaggcggaggtgtcagccctgaagaccatggtcctaacctccaccccgtcttcc
cccaatcgccaggcccaccctcagctcctctccccgggcactaggtccaagggggccagc
ccccgccatggaggaggacacacgcgcaacaagagcgccagctgggccttgccattggcc
cctggtgggaacttagactcgcactccctgcagccagtcagagaggacaaagagcctacg
gttcctgcgctcctctctctgattttgtgtctggttccgggccactcgatctctgtgacc
tatgaaccctactgggcagagaagggggaggggccacgctctctcagccgacagatggac
aacgtgctgtatgcagagttcctgacctggaaagacaaacctagtctggacagaacatca
gctttcctgggccgtatatacagagaggacatcggcccctgtctctccttcaccaaatct
gagttgtctcagtcggtgcagaatgcagtggagaacaactcgctgaccatcgaaccggtg
gccgtgtctgctttacccatggtcaaagccaacgccatagagtgtggcgggcccaatggc
ctgagagcagcagtagagacgaagtgtgcgttgagcggcatgtcccggtcctgtaagcac
cgcatcaaacttggagacagagagagttactaccacatctctccctccagcagggcacgg
attacagcggtgtgtaatttcttcacctatatccgctacattcagcagggcctggtcaga
catgatgcggagcagatgttctgggaagtgacacgtctacggcgggagatgactgtggcc
aagctgggcttctacctcacagacacagaccagggatag
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