Oncorhynchus kisutch (coho salmon): 109885224
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Entry
109885224 CDS
T09179
Symbol
jag1
Name
(RefSeq) LOW QUALITY PROTEIN: protein jagged-1
KO
K06052
jagged-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04330
Notch signaling pathway
oki04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109885224 (jag1)
04371 Apelin signaling pathway
109885224 (jag1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oki04090
]
109885224 (jag1)
CD molecules [BR:
oki04090
]
Proteins
109885224 (jag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_DL_JAG
DSL
EGF_2
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
Motif
Other DBs
NCBI-GeneID:
109885224
NCBI-ProteinID:
XP_031654891
Ensembl:
ENSOKIG00005031291
LinkDB
All DBs
Position
LG20:complement(3089030..3185309)
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AA seq
1257 aa
AA seq
DB search
MILRRGSVVGVADFCLHALLLCFCAKVAEGTGQFELEILSMNNRNGELLSGLCCDGSRIT
GDRKCRMDECDTYFKVCLKEYQSRVSAAGPCSFGSGSTPVLGGNTFSLKNSAKNERSKIV
LQFSFAWPRSYTLIVEALDANNDTSGGDGQVIEKASHSGMINPSHQWQKLSHNGPIGQFD
YQIRVSCDEHYYGFGCNKFCRPRDEFFGHYTCDYNGNKTCLEGWSGLECNTPICRQGCST
EHGHCKEPGDCKCLYGWQGQYCDQCNPHPGCVHGTCVEPWQCLCDTNWGGHLCDKDLNFC
GTKQPCLNGGTCSNTGPDKYQCSCVEGYSGVNCERAEHACLSEPCSNGGSCVETSLGYEC
VCSPGWSGPSCSINVDECSPNPCNHGGTCQDLVHAYKCLCPPQWTGKTCRIDANECDSKP
CVNANSCRNLIGGYFCECVPGWTGQKCDININDCKDQCQHGGTCRDLVNGFRCVCPAGYS
GDHCERDVDECAGAPCLNGGRCQDQVNGFTCLCLAGFSGQLCQLDIDYCLVNPCQNGAAC
YNLATGHYCACSDDYEGKNCSHLKDHCHTSTCKVIDSCTVAVGSNSTPGGERYISSNVCG
PHGRCRSQAGGQFSCDCQEGFRGTYCHENINDCESNPCGNGGTCIDKVSVYQCICGDGWE
GDHCETNIDDCSTSPCHNGGTCRDLVTDFFCECMNGWKGKTCHSRESQCDEATCNNGGTC
HDEGDTFQCKCSPGWEGATCNIAKNSSCLPNPCEYGGTCVTIGDSFTCVCKEGWEGDTCK
QNTNDCNPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCIFGSSCIDEIN
GYRCLCPQDRAGPRCQEVTQRSCSVNGRLTPEGAKWDEDCNTCQCFNGKVVCTRMWCGPM
SCRVSGGVKGRGGGAGCRSGQSCVPIREEQCFVRPCLNLGECLPSSPPTTKCHPSSGYHD
NSCSNITFTFTKETMPRGLSIEAVCKQLRQLYVLSNVSSEYSVSITCDPSTSASNEIHLS
IYTEAHPMDRSPIKEITDRLADLVSKHHGNNSIISAIAKVRVQRRPSASQTDYLVPLLSS
VFILLWILALVSVFLYCVRRRRKHGGHHGNGALSSAATDDNTTNNVREQLNQIKNPINEK
HAGGGGHLTTSVAIKDYEDKNSIIAKVRTHHPPEGEEDNDKERHMGNKGRFTVPAKQPAY
TLVEREDWGLNGGLGANGANEGDGRTPVQPSSKHWTNKQDNRALETAHSINRMDYIV
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagaaggggctccgttgttggcgttgctgatttttgcttacatgccttattg
ttgtgcttttgtgcaaaggtggccgagggaaccggtcagttcgagttggagatcttatcg
atgaacaaccggaacggcgagcttcttagcgggctgtgttgtgacggttcgcggatcacc
ggggatcggaaatgcaggatggatgagtgtgatacgtattttaaagtgtgtttgaaggaa
taccagtcgcgggtttcggctgcgggaccttgcagcttcgggtccggttctacccctgtc
cttggagggaatacattttctttgaagaactctgcgaagaacgaaagatccaagattgtt
ttgcagttcagtttcgcctggccgaggtcctacacgttgatagtggaagccttggatgcg
aacaatgacaccagcggtggtgatggtcaggtgattgagaaggcgtcccactctgggatg
atcaaccccagccatcagtggcagaagctcagccacaacggtcctattggtcagtttgac
tatcagatccgggtcagctgtgacgagcactactacggcttcggatgcaacaagttctgc
cgaccccgagacgagttcttcgggcactacacctgcgactacaacgggaacaagacctgt
ctggagggctggtctggactagaatgtaacacacccatttgtcggcagggctgcagtaca
gaacatggacactgcaaagagccaggtgactgcaagtgtttgtatggctggcaggggcag
tactgtgaccagtgtaatcctcaccctggctgtgtccatggaacctgtgttgaaccatgg
cagtgtctatgcgataccaactggggaggacatctctgtgacaaagatctgaacttctgt
gggaccaaacagccctgtctgaacggaggaacctgcagcaacacgggacctgacaaatac
cagtgttcttgtgttgagggctactctggagtcaactgtgagagggcagagcatgcatgt
ctgtctgagccctgctctaatggagggagctgtgttgagaccagtctgggttatgagtgt
gtctgttccccgggctggagtggaccctcctgtagcatcaatgttgatgagtgctctcct
aacccctgtaaccacggtgggacctgtcaggatctggttcatgcttataagtgtctctgt
cctcctcagtggaccggaaagacctgccgaatcgacgccaacgaatgcgacagcaagccc
tgtgtcaacgccaactcttgccgcaacctgattggtggatacttctgcgagtgtgttcct
ggttggacgggacagaaatgtgacatcaatatcaatgactgcaaggaccaatgccagcac
ggaggaacctgcagggacttggtgaacgggttccgctgtgtatgtcctgcgggttactct
ggagaccactgtgagagagatgtggatgagtgtgccggcgctccctgtctgaacggcggg
cgatgccaagaccaggtcaacggattcacctgcctctgtctggcaggattctcgggacaa
ctctgtcagttggacatagactactgcctcgtcaacccatgtcagaatggagccgcatgt
tacaacctggctacaggtcactactgcgcctgttcagacgactacgaaggaaaaaactgc
tctcacctcaaagaccactgtcacaccagcacgtgtaaagtgattgacagctgcacggtt
gccgtgggatccaacagtacccctggaggagagcggtacatctcctccaacgtgtgtggt
cctcacggacgctgtcggagccaggctggaggacagttcagctgtgactgtcaggagggc
ttcagaggcacatactgtcacgagaatattaatgattgtgagagcaacccgtgtggtaac
ggaggaacctgtatagataaagtcagtgtataccagtgtatctgtggagacggctgggag
ggggaccactgcgagaccaatatagatgactgcagcactagtccatgccataatggagga
acatgtcgagacctggtgactgatttcttctgtgagtgtatgaacggctggaaggggaag
acctgccactcccgtgagagccagtgtgacgaggctacctgtaacaacggagggacatgc
catgacgagggagacaccttccaatgcaagtgttcccctggatgggagggggctacctgt
aatatagctaagaatagcagctgtcttcctaacccctgtgagtacgggggaacctgtgtg
accatcggggactccttcacctgcgtctgcaaggagggctgggaaggagacacctgtaaa
cagaataccaacgactgcaacccacacccatgttataacagtgggacctgtgtagatggt
gataactggtatcgatgtgaatgtgctccaggcttcgctgggccagactgcaggatcaat
atcaacgagtgccagtcttctccctgtatctttggatccagctgtattgatgagatcaat
ggctatcgctgcctgtgtccccaagacagagctggaccacgctgtcaggaagtgacacag
aggtcgtgctcggtgaacggtcgtctgacccctgaaggagctaagtgggatgaggactgc
aacacctgtcagtgttttaatgggaaggtggtgtgtaccaggatgtggtgtggtcctatg
tcgtgccgggtcagcggtggggtcaaaggtcgaggtggcggagctgggtgtcggtctggt
cagagctgtgtaccaatcagggaggagcagtgttttgtccggccgtgtctgaatcttggg
gagtgcctcccctcctccccaccaaccaccaaatgtcaccccagctccggttaccacgac
aacagctgttccaacatcacgtttacgttcaccaaggagaccatgcccaggggtctgagt
atcgaggcagtgtgtaagcagctgagacaactctatgtgctgagtaatgtgtcctctgag
tattctgtttccataacctgtgacccttcaacctccgccagcaacgagatccatctcagc
atctacacagaggcccacccgatggacagatcccctataaaggagataacagataggctc
gccgatctggtgtctaaacaccatggcaataacagcatcatcagcgccatcgccaaggtc
cgtgtgcagcggaggcctagcgccagccagacggactacctagtacccttgctgtcctct
gtcttcattctcctctggatcctggcgttggtctcggtcttcctctactgcgtgcgtcgc
cgtcggaaacatggcggtcaccatggcaacggagccttgtcgtccgcggcaaccgacgac
aacacaaccaacaatgtgcgtgagcagctcaaccagatcaagaacccgatcaacgagaaa
cacgccggaggcggcggccatcttacaacatcggtggccatcaaggactacgaggataag
aactcgatcatcgccaaggtacggacacaccaccccccggagggggaggaggacaacgat
aaagagagacatatggggaataaaggacgctttacggttccagccaaacaacccgcctac
acactggtggagcgggaagactggggcctcaatggaggcctgggggccaacggggccaac
gaaggggacggcaggaccccggtgcagcccagctccaaacactggactaataaacaggac
aacagagccctggagacggcacacagcatcaacaggatggactacatcgtatag
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