Oncorhynchus kisutch (coho salmon): 109885334
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Entry
109885334 CDS
T09179
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109885334
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109885334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_HPS5
WD40_RFWD3
eIF2A
Beta-prop_TEP1_C
MIOS_WD40
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
109885334
NCBI-ProteinID:
XP_020332772
Ensembl:
ENSOKIG00005010998
UniProt:
A0A8C7FB10
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Position
LG13:74227385..74232545
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AA seq
451 aa
AA seq
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MSAPGEDTLPNEDGEMEEMEGGGSDEDEMEEEGKDGEQETQVYVPGKQPLQPGEELEMDR
SAYRMYHECQTGAPCLSFDVLRDANGDGREQYPLSMLLCAGTQADAALSNRLLLIRMHNL
HGTTEKVKEGDESSDGESDEEDDDEDKKPQMELAMMPHYGGINRVRVTHRGDQSLAAVWS
EKGQVEIFDLRSQMEAVHSSAAMSTFVKQQKEATPLFSFSGHMSEGFAIDWSPKVPGRLV
SGDCKKNIHVWEPQEGGTSWQIDQRPFSSHTKSVEDLQWSPTEATVFASCSVDQSIRVWD
TRAPPNSMLCAKEAHSSDVNVISWNRTEPFLLSGGDDGLLKVWDLRQFQSGRPVANFKQH
SAPVTSVEWNPVDSSVFAASGADDVVSQWDLSVESCDVGARAEGVKDLPPQLLFLHQGQT
EVKEIHWHPQIPGVMVSTALSGFNVFRTISV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcccggagaagacacgcttccgaatgaagatggagagatggaagaaatggaa
gggggtggcagcgacgaagacgaaatggaagaagagggaaaggatggagaacaggaaact
caagtttatgtccccggaaaacagcctctccaacccggagaggagctcgagatggaccgg
tcggcttaccgcatgtaccacgagtgtcagacaggtgctccttgcctgagcttcgacgtg
ttgagagatgcgaatggagacggcagggaacagtatcccctctctatgctgctctgtgca
ggcacacaggctgacgctgccctcagcaacagactgcttctcatacgcatgcacaacctc
cacggtactacagagaaagtgaaggagggggacgagagcagtgatggagagagtgatgaa
gaggatgatgatgaagataagaagccacagatggagttggccatgatgcctcactacgga
gggatcaacagagtccgagtgacccatcgtggagatcagtcattggctgctgtctggtca
gagaaaggtcaggtggagatatttgacctccgatcccagatggaagccgtccacagttca
gctgccatgtcaacctttgttaaacagcagaaggaagccacgcccctcttcagtttctcg
ggtcacatgagtgagggctttgccattgattggtcgcccaaagtacccggtcggctggtc
agtggcgactgcaaaaagaacatccatgtgtgggaaccacaggagggagggacttcctgg
cagatcgaccaacggcctttcagttctcacaccaagtccgtggaggacttgcagtggtca
cccacagaagccacggtttttgcgtcctgctctgtggatcagtccatccgggtctgggac
accagagccccgcccaactccatgctatgtgccaaggaggcacactcctcagacgtcaac
gtcatcagttggaacaggactgaaccattcctcctgtccggcggggacgacggacttctg
aaagtttgggacttgaggcagttccagtcgggccggccggtggctaacttcaagcagcac
agcgcaccagtgacatcagtagaatggaaccctgtggactccagcgtgtttgccgcctct
ggagcggacgacgtggtcagccaatgggacctatcggtagagtcatgtgatgttggtgcg
agggcagagggggtgaaggacctgcccccccagctgctgttcctgcaccagggtcagaca
gaggtcaaggaaatccactggcacccgcagatacctggagtgatggtctctactgctctg
tcaggcttcaacgtgttcaggacaatctctgtatag
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