Oncorhynchus kisutch (coho salmon): 109885412
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Entry
109885412 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: dysferlin-like
KO
K18261
dysferlin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109885412
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109885412
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Others
Ferlins
109885412
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109885412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
FerI
Ferlin_C
Pex24p
CEP76-C2
Motif
Other DBs
NCBI-GeneID:
109885412
NCBI-ProteinID:
XP_031648919
LinkDB
All DBs
Position
LG16:6329580..6573672
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AA seq
1591 aa
AA seq
DB search
MLRVFILCAERLHTEDDDVSDAYCRVVYEGSKKKTKVIKNNINPVWNEGFEWDLKGIPLD
SGAELHLVVKDHEKIGRNRFLGESRVALRDILNSSNLAASFTVSLLDTKRNNTGATLSLQ
VSYIPPPGMTPFFQPPPQPEAREKPVELDTVTVFSLDTMGEEDTESMLMMEQTDDPDTGS
HQGPHQGGQDGQETPTAQTPKRAPPNYTPGVKRKKRQQGNKAPLPNKPQDLQVRVRVIEG
RQLPGINIKPVVKVTVGGQSKRTRIRKGNNPVFDETFFLNFFESPSDLFDEPIFITVFNS
MSLRTDSVIGEFKLDVGTVYNESRHAFLRKWLLLSDPDDLSAGAKGYLKVSLFVLAAGDE
APVDKKEGVVDKEDIEGNLLRPAGLTLRGAIFTLKVFRAEDLPQMDDAFMDGMRQVLGFD
SNRKNLVDPLVEVNFAGKNVCSKIMEKNANPQWNQSLAMPIRFPSMCEKMRVRVLDWDRA
SHNDVIGTAHLCMSKISAPGGAIDDELVPRNLQSFMDDSLGFLPTFGPCYVNLYGSLREF
TAFNDPHEALNLGKGEGVAYRGRVLMELSTKLVDTVQASVEDITNDDLLVVQKFMRKRKY
SLFASFYSATLLQDVDDAIQFEVSIGNYGNKFDYTCLPLASTTQFSRAVFDGCHYYYLPW
LLSSPLSFLSLIQPQNSLPDIVIWMLQGDRRVAYHRIPAHTVLFSQRHCGKHCGELQTVF
LKYPQGGSGDSKLPAQIRVKVWFGLAADVKHFNQFAEGKLSVFAETYENQTKLALVGSWG
TTGLTYPRFSDVTGRVKLPKESFKPSPGWSWAGEWVISPEKTMLYDTDAGHMSFTEEVFE
NQMRLPXGQWIGMPEGYTDVNGEKAVPKDEVECPPGWVWSDEEWSEDLNRAVDDQGWEYG
LTIPPDRRPKAWVPAEKMYHTNRRRRWIRLRRRDMQKMEALKKQRPDEAEREGWEYASLF
GWRFHLKPRKTDSFRRRRWRCRMEPLEKTGPAAIFALECSLGSVTEDKSDEKSVTATXGV
NRPTISCLFHSGTRYHLRCYLYQARELLAMDKDSFSDSYAIVSFLHQSQKTVTVRNTLNP
TWDQTLIFYEVEVFGDADVTERSPPNVVVELYDQDTYGADEFMGRCVCQPSTTPSPRLAW
YPIRMGDRSAGELLAAFELIRREKPAVHHIPGQEGDIPPHIMDEVFLTGFLSENQQWPKD
SDLPNPPPQREPNVYMVPQGIKPVLQRTAVEILAWGVRNLKSFQLASVTSPSLQVECGGI
MVQSCVIRSTKKKPNFDINTLFIDVRLPCEELYMPPIILKIIDNRQFGRKPVVGQCTIRN
LEDYRCTPEEEGEEEEDELEEVVQTPRDDVLIDIDDKEPLITSQEEEVMDWWSKFYASTG
ETNKCGNYLEKGCDTLQVYDRPLEKIEGFERLSDFCQTFKLYRGRNQDEGEDPSIVGEFK
GMFKIYSLPEDPSTSAPPRQFRQLPSNSIEECLVRVYIIQATGLQPKDSNGKCDPYVKIS
LGNKSINDHDNYLPCTLDPVFGKRPETSFLWFSSPYKTLKYILWGRYKFLILLFILLFFL
FLFIGVFLYSFPNYAAMKMVGPFSGPAKGTK
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagtttttatcctgtgtgctgagaggcttcatacagaagacgatgacgtcagt
gatgcctactgcagagtcgtctatgaaggatcgaaaaagaagacaaaagtcatcaagaat
aacataaaccctgtttggaatgagggttttgagtgggacctgaagggaatacctctggat
tcaggagctgagcttcatttggtggtcaaggatcacgagaagatagggaggaacaggttc
ctgggggagagtcgagtggctctcagggacatcctcaactcctctaacctggctgctagc
ttcactgtgtccctactggataccaagaggaacaatactggggccacactgagcctgcag
gtttcctacatccctcccccaggaatgactcctttcttccagcctcctcctcagccagag
gcccgggagaaacctgtggagctggacactgtcacagtcttctcattggacaccatgggt
gaggaggacacagagagcatgttgatgatggagcagacagatgacccagacaccgggagt
caccagggaccccatcaggggggccaggacggccaagagacccccacagcccagacccct
aaacgggcccccccaaactacacccctggagtgaagagaaagaagaggcagcagggtaac
aaggcaccgctcccaaacaaaccacaggacctgcaggtgcgcgttcgagtcatcgaaggc
cgccagttgccgggcatcaacatcaaaccggtcgtcaaggttactgttggtgggcagtcc
aagaggactcgcatcaggaaaggaaacaacccagtgtttgatgagactttctttctgaac
ttctttgagagtccgtcagacctcttcgatgagcccatcttcattactgtttttaactcc
atgtcgttgcgaactgactcggtgataggagaattcaagcttgatgttggcacggtctac
aacgagagcagacacgccttcttgaggaagtggctcctcctctctgaccctgacgacctc
tcggccggggccaaaggttacctgaaggtcagcctcttcgtattggctgcaggcgacgaa
gctccagtggataagaaggagggagtggtggataaggaggatatagaggggaacctgttg
cgtcctgctggactcacactcagaggagccatcttcacactcaaagtattcagagctgag
gacctgcctcagatggacgatgcctttatggatgggatgagacaggtcctgggattcgac
agcaacaggaagaacctggtcgaccccttagttgaagtcaacttcgctggaaaaaacgtg
tgcagtaagatcatggagaagaatgccaaccctcagtggaatcaaagcctggccatgccc
atacggttcccctccatgtgtgaaaagatgagggttcgtgtcctggactgggaccgagcc
agccacaatgatgtcatcgggaccgcccatctctgcatgtctaagatctctgccccggga
ggagcgatagatgatgaattggtcccaaggaaccttcagagtttcatggatgacagtctg
gggttcctgccgacctttggcccctgctacgtcaacctgtacggaagcctcagggagttc
accgccttcaacgacccccacgaggctctcaacttgggcaagggtgagggagtagcgtat
cgtggtcgtgttctgatggagctcagtaccaagctggtggacacggtgcaggcgagtgta
gaagacataaccaatgatgacctattggtggtacagaaattcatgcgtaagagaaagtat
tctctctttgcgtcgttctactccgccacgctcctccaggacgttgacgacgcgatacag
tttgaggtcagcatcggtaactacggcaacaagtttgactatacctgtcttcctctggcc
tcaacgacgcagttcagccgagctgtgttcgacggttgtcactactactacctgccgtgg
cttctctcctctcccctctctttcctgtctctcatccagccccagaacagtctaccagac
atagtgatctggatgctacagggagatcgtagagtggcataccatcgtatccctgcacac
actgtcctcttctcacagagacactgtggcaagcactgtggggagctacagaccgtcttt
ctgaagtacccccaaggtggatcaggagacagtaagcttccggcccagatcagagtcaag
gtctggttcggtctggctgcggacgtaaaacacttcaatcaatttgccgaaggcaaactg
tctgtgttcgctgaaacgtatgagaaccagactaagctggctctggtgggtagctgggga
accacaggactgacataccccaggttcagtgatgttacaggcagggtgaagttacccaag
gagtccttcaaaccctcaccgggctggagctgggctggggagtgggtcatcagcccagag
aagacgatgctgtatgatacagacgcaggtcacatgtccttcacagaggaggtgtttgag
aaccagatgaggttaccgnggggacagtggatcggcatgccagaaggatacacagatgtg
aacggggagaaggcggtgcctaaggacgaggtcgagtgtcctccggggtgggtgtggtct
gatgaagagtggagcgaagatctgaaccgggctgtggacgaccaagggtgggagtacggc
ctgactattcccccagatcggagacccaaggcctgggtaccagccgagaagatgtaccat
accaaccgccgtcgccgttggatacgcctcagacgcagagatatgcagaagatggaggct
ctgaagaagcagcgaccagatgaagcagagagagagggatgggagtatgcatctctgttt
ggatggaggttccatcttaaaccccggaagacagactcattcaggaggaggagatggaga
tgtcgtatggaaccactggagaagacgggacctgctgctatcttcgccctggagtgttca
ctggggagtgtgacggaggataagagtgatgagaaatctgtgacggcgaccnttggggtc
aaccgccctaccatttcctgcctcttccacagtgggactcgctaccacctgcgctgttac
ctgtaccaagccagagagctgctagccatggacaaagacagcttctcagattcctatgcc
atagtttcgttcctccatcagagccagaagactgtgactgtgcgtaacacgttgaacccc
acctgggaccagacactcatcttctacgaggtggaggtgtttggagatgctgatgtgaca
gagagaagccctcctaacgttgtggtggagctgtacgatcaggatacatatggggcagat
gagtttatgggtcgctgtgtgtgtcagccctccacgaccccctcccctcgtctggcctgg
tatccaatcaggatgggagacaggagcgcaggagaactactggctgccttcgaactcata
cgacgcgagaagcccgctgttcatcacatccctggacaggagggagacatcccccctcac
attatggatgaggtctttctaactggattcctctcagaaaaccagcaatggcccaaggat
tctgacctgccgaacccgcccccccagagagaacccaacgtctacatggttcctcagggg
atcaaacctgttctacaacgtactgctgtagagatcttggcatggggagtgcgtaacctg
aagagcttccagctagctagcgttacctctcccagcctgcaggtggagtgtggaggcatc
atggttcagtcctgcgtcatacgatctacaaagaagaaacccaacttcgacatcaacaca
ctcttcatagacgtgagactgccctgtgaggagctttatatgccacctatcattctgaag
atcatcgacaacagacagtttgggaggaaaccggtggtgggacagtgtacaatcaggaac
ctggaggactatcgctgtacccctgaggaagagggggaggaggaagaggacgagcttgag
gaggttgtccagacgcctcgtgacgatgttctgatcgacatcgatgacaaggaacccctc
atcacctcacaggaggaggaagtgatggactggtggtctaagttttatgcttcgaccgga
gagacgaacaagtgtggaaactacctggagaagggatgtgacacactacaggtgtatgac
aggccactggagaagatagagggatttgagaggctgtcagacttctgccagaccttcaag
ctgtaccgtgggaggaaccaggacgaaggagaggacccctctatagtcggagagttcaag
ggtatgttcaagatctattctctcccagaggacccctcgacctccgcacctccccgacag
ttccgtcagctaccctccaacagcatcgaagagtgtctggtcagagtctacatcatacaa
gccaccggacttcaacctaaagactctaacggaaagtgtgatccgtacgtgaaaatcagt
ctgggcaacaagtccatcaacgaccatgacaactacctaccttgcaccctggaccctgtg
tttggaaaacgtcctgagacatcgttcctgtggttctcctctccctacaagacattgaag
tacatcctgtgggggagatacaaattcctcatcctcctcttcatcctcctcttcttcctc
ttcctcttcatcggagtcttcctctactccttccctaactatgcagccatgaagatggtc
ggaccgttcagtggacctgctaaaggaactaaatga
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