Oncorhynchus kisutch (coho salmon): 109885417
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Entry
109885417 CDS
T09179
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04140
Autophagy - animal
oki04148
Efferocytosis
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109885417 (vps16)
04148 Efferocytosis
109885417 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109885417 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109885417 (vps16)
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109885417 (vps16)
Hops complex
109885417 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF740
Motif
Other DBs
NCBI-GeneID:
109885417
NCBI-ProteinID:
XP_031676568
Ensembl:
ENSOKIG00005046709
UniProt:
A0A8C7KUK8
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MAFITANWNPLGEAFYRKIELYEMGWSLRDGLKECLVAAAPYGGPIALLRQPQRPSSSAR
PQLEIYSSSGANMASFPWKSGPVRQLGWTVCDDLLCIQEDGTVLIYDLFGAFKRHFSMGN
EVVQNQVLEAKVFHSPYGTGVAIVTGASRFTLATNIDDLKLRRLPEVPGLQGAPSCWAVL
TQDRQTKVLLANRADLYILDNTSCTPVTPPGLSLQSCSIVNMAVSFSYKYLALFTDSGHL
WMGSANLKDKLSEVDTKVRTPPKQMVWCRRPKSQQPSVVIMWDRLLLVAGECTDTIQYTL
DEESVCVAELDGVRIVGGSRHELLQEVPSACQDIFKIASMAPGALLLEAHKEYEKSSQKA
DEYLREIKEQSVLGEAVRQCVEAAGYEHEPETQKTLLRAASFGKCFLSNYPPEPFVSMCR
DLKVLNSVREYTVGIPLTHTQYKQMTVQVLIDRLVYRKLYPLAIEICRYLKTPEYQGVSR
VLKHWACCKVQQKEEPDESIAHAVSVKLGEAAGISYSEIAARAYECGRTELAIKLLEFEP
RSGEQVPLLLKMKRSQLALSKAIESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKHQEQDTLKDLFNQDDDHQELGNFYVKASYKEKKLEARLSLLQSAVDEYNKAKNE
FAAKATEEEMKLLRFQRRLDEEMGEALLGLSLQETLHALLTSNFHKQAEQLYRDFRVPDK
RYWWLKLTALAEKDDWEEMEKFAKSKKSPIGYLPFVEVCVKQHNKYEAKKYVSKVTPEQK
VKAHLAIGDLEGAAEAAIERRSEGEISTVLSRCSPTTDRALLERLNRARSTAAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcatttataacggcaaactggaatccgctcggggaagcgttttacaggaagatcgag
ctgtatgagatgggatggagcttgagagatgggctcaaggaatgtctggtggcagcagcc
ccatacgggggaccgatcgctcttctaaggcagccacagaggccttcctccagtgcacgg
ccccagctggagatctattcctcctcaggcgcgaacatggccagcttcccgtggaagagt
ggcccagtgagacagctgggttggacagtgtgtgatgacctgctgtgtatccaggaggat
ggcactgtcctcatctatgacctgtttggtgccttcaaaagacacttcagcatgggcaat
gaggtggttcaaaaccaggtgctggaagccaaggtgttccactcaccctatggaactggt
gtcgccatagtaacgggagcctcacgcttcaccctggccacgaacattgacgacctgaag
ctgaggagactcccggaagtcccaggcctccagggggcaccttcctgctgggcagtgctc
actcaggacagacagaccaaagtgctgctggccaacagagctgacctctacatactggac
aacacatcctgcacccctgtgacccctcccggcctctctctacagtcctgtagcatcgtg
aacatggctgtgtcattcagctataagtacctggctctgttcacagactctggacacctg
tggatgggctcagccaacctcaaggacaagctgagtgaggtggacaccaaggtgaggacc
ccacctaaacagatggtctggtgcagaaggccaaagagccagcagccctctgtggtcatc
atgtgggacaggctcctactggtggccggagagtgtacagacaccatccaatacactctg
gatgaggagagtgtgtgtgtagcagagctggatggagtgaggatcgtaggagggtccagg
catgagctgctgcaggaggtgccctcggcctgccaggacatctttaaaatcgcctccatg
gctcctggagctttactactggaggcacacaaggagtacgagaagtccagtcagaaggca
gatgagtacctgagagagataaaggaacagagtgtattgggggaagcggtgagacagtgt
gtggaggctgctgggtatgaacatgaaccagagacccagaaaacactgctcagggctgcg
tcctttgggaagtgttttctcagtaactacccaccagagccgtttgtcagtatgtgtcga
gacctgaaagttctcaactctgtccgggagtacactgtggggatccccctcacacacaca
cagtacaaacagatgactgttcaggtcctcattgacaggttggtgtaccgtaagctgtat
cccctggccattgagatctgtcgctatctgaagacaccagagtaccagggtgtcagcaga
gttctcaaacactgggcctgctgcaaggtccagcagaaagaagagcctgatgagtccata
gcacatgctgtcagtgtgaagctgggcgaggcagcaggaatctcctactctgagatcgct
gccagagcatatgagtgtggcaggacggaactggccatcaagttgttggagtttgagcct
cgttctggggagcaggtcccccttctactgaagatgaagaggagtcaactggccctgagt
aaagctatagagagtggagacacagacctggtttacacggtggtgacatacctgaagaac
gagatgaacagaggagacttcttcatgacgctcagaaaccaaccggtagcgctgagcctc
taccggcagttctgtaagcaccaggaacaggacacactgaaggatctgttcaaccaagac
gatgaccatcaggagctgggtaacttctacgtcaaggccagttacaaggagaagaagctg
gaggctcgcctgtctctgctgcagagtgctgtggacgagtacaacaaggccaagaacgag
tttgcagccaaggcgacagaggaggagatgaagctgctacgtttccagaggcgcctggat
gaggagatgggagaggctctgctgggcctgtctctccaggagactctgcatgccctcctc
acctccaacttccacaagcaggctgagcagctctacagggacttcagggtgccagacaaa
aggtactggtggctgaagctgaccgctctggcagagaaggatgattgggaagagatggag
aaatttgccaagagcaagaagtcccccatcggctatctaccctttgtggaggtgtgtgtg
aaacaacacaataagtacgaggccaaaaagtatgtttccaaggtgaccccagagcaaaag
gtcaaagcccacctggccataggtgatctggagggggcagccgaggcagctatagagagg
aggagtgaaggagagatcagcactgtcctgtcccgctgttctcccaccacagaccgagcc
ctgcttgagagactcaaccgagccagatccactgctgccaaaaagtga
DBGET
integrated database retrieval system
