Oncorhynchus kisutch (coho salmon): 109885532
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Entry
109885532 CDS
T09179
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04136
Autophagy - other
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109885532
04136 Autophagy - other
109885532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109885532
03029 Mitochondrial biogenesis [BR:
oki03029
]
109885532
Membrane trafficking [BR:
oki04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109885532
Atg1 complex
109885532
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109885532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109885532
NCBI-ProteinID:
XP_020332969
Ensembl:
ENSOKIG00005009343
UniProt:
A0A8C7DXR4
LinkDB
All DBs
Position
LG3:56355295..56366229
Genome browser
AA seq
549 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHEAKKALSGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RLSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNMGHMRPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQCVFTVSKAHLKTPKPAVMDTLKVPMMGLAFSHQLYCS
RLSYQPPVLVGAADFCHPSTLNAANPHQVTTQMGIPGKEGGIPQQVPVQPCHGAQAEHGR
VSSCPPADHVPATPSSSGEGAETLSRSIEVKGVSPCDVLETTFTRKVGAFVNKPGTQVTT
ASLDLPFAAFAPRAYDLEENDPMVQPPESPATSSPLQGSLHSQGSGESGGPAQDDFVMVD
FKPAFSKDDLLPMDLGTFYREFQNPPQLASLTIDVSSQSMAEDLDSLPEKLAVYEKNIDE
FDAFVDTLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgctttgaagacagtgcaggtgatagtccaagcgcgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaatctggcaatcaaagatatccca
gaagttacacacgaggcaaagaaagctctgtccgggcagcttcctggcatcggacgatcc
atgtgtgttgagatctccctcaaaacctcagagggagactcaatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaggtgtcctacactgtctacaac
cgcctgtcattactgctcaagtcactgctggccattacaagggtaaccccagcctacaaa
ctctcacgaaagcaaggccatgactatgtcatactgtacaggatatattttggagaggtt
caactcacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactccc
attggaacaatcaccttgtcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataattattgaccacttcgttgagcgcccc
tttggcaacatgggacacatgcgtccatgtaactacagagcacccggggaagatgaagga
gcatacaatggggtggaagattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaatgtgtgttcactgtaagtaaggcacatttaaagacccctaaacctgcagtg
atggacactctgaaagtccccatgatgggcctggccttctcacaccaactctactgctct
cgtctttcttatcagcctcctgttcttgtcggagctgctgacttctgccacccttccacc
ttaaacgctgccaacccacaccaggtaaccacccagatgggaatcccagggaaggagggg
ggcataccccagcaggtgcctgtgcagccttgtcatggtgcccaggcagagcatggacga
gtgtcctcatgcccccccgctgatcatgttcccgccactccctccagcagtggtgagggt
gcagagaccttgtcgaggagcattgaggtgaagggtgtctctccctgtgatgtactggag
accaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacacaggtaaccaca
gcaagcctggacttaccatttgcagcgtttgctcccagagcctatgacctcgaggaaaat
gaccctatggttcagccgccggagtccccagccacgtcctctcccctgcagggcagttta
cactcccagggctctggtgagagtggtggcccggcacaggacgactttgttatggtggac
tttaagcctgcgttctctaaggatgacctgcttcccatggaccttggcacattctacaga
gagttccagaaccccccacagctcgccagcctcactattgatgtcagttctcagtccatg
gcagaagacctggactctcttcccgaaaaacttgcagtatacgagaagaacattgatgaa
tttgatgcatttgtggacacattgcagtag
DBGET
integrated database retrieval system
