Oncorhynchus kisutch (coho salmon): 109885719
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Entry
109885719 CDS
T09179
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109885719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109885719
03036 Chromosome and associated proteins [BR:
oki03036
]
109885719
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109885719
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109885719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
109885719
NCBI-ProteinID:
XP_031645335
Ensembl:
ENSOKIG00005035126
LinkDB
All DBs
Position
LG15:2276794..2335301
Genome browser
AA seq
1375 aa
AA seq
DB search
MSRTSAESTDQMMEQEVGQLPITDQMEEEEEDDEEEEEEEPGSSEETERPSSSHTKRKPA
VTAKHTGGNESDTSDESGQEDGASDNPSDDTTLQERIDCTACGQQVNHFQRHSVFEHPML
HVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRKE
LSMITDEDSKWSCYICSPQPLSDIASNCSNILTKLESFWRTGCKKERKEVKGHSKGKGHH
HHGKAVVNGKEHSDGSGTLTFSYKTLKVLKELVKRTKKLIETTTGLNSTFIQQAEEEQGA
GGGGSGTRHLKAFRSVLADMKKAHAALEEDLESQFTSQDQGMQNGDAVSNTDGHDGHDQI
DNMVDGQEAEEDKMADTEDGEEHGGLSEDAEMEGSPAPAPQDHSDTETDSQAKDQTAVEE
EEDGEEEEGDRKKDIVSVGLAVPDELFQMVESLADSAGLKPGNDAMETTAASQSESPAAD
SNRKSLETHKEKAMPKVKNLIVKLTPVPVVTTRTSRSMSKDKDGGKERSKDGGKERSKDG
GKEKSKEEVEGGGGSEEDSRRSSRTKTTPLRKSPDGKNKMAESSPENSDSEGKSPSRLKS
RTKGSSEKEREEEEEEEQQSNASSKVTADPSKHEVDSDEVLDILLQTAAAEHSSDEDAQQ
DADGNQGNRSFKRCLFKLSKKDGEEEENDKVKTDKKLAAKRKLKADDSDNSESDSDEDTK
RKKKKSSSASAKKTSKKKGSDGSSNSDSDLEMKGLSQLATGKRRSSRVKKEREEKENKGG
DRRRSYELKRKARSRGAKQQDSSSDDKEEGGGSGEESGDQQKIKPIVEETLVAGRGTFHQ
SSGDEGNHDASQMADEEDDDDDPENRIAKKMLAQIKANYSSGAEESSDEDGEEKEQKKEK
GGEEQEEDNDDDDDEGGSGSDVDVKTSVGRHHRLLRHKLTLYEVESGEEKEKPASKGKKE
TKRTRRKVGSDDSADPDFKESASSSESGVSEEISEKESWSEESESEKEGSRHRRTTRSSV
KRKKKKKERSYAQKKKRRRIKALDSSSDDKSGSGEDGSGKEDGDTPKGQRKKIRKILKDN
ELRTETRDALKEERRRRIAEREQLREKLRETLHVPPDQVLVVEEASAVACPITTKLVLDE
DEETKEPMVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKTNKNSGSGCILAHCMGLGKT
LQVVTLLHTLLLCEKLDFSTALIVCPLNTVLNWLNEFEKWQYGFKDKESLEVTELATVKR
PQERASALQQWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEG
HILKNEASDISKAMNSIKTRRRVVLTGTPLQNNLIECMSVTSCYIQTAGLQGIRK
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaacctcagctgaatctacagaccaaatgatggaacaggaagtaggtcaactt
ccgattacagaccagatggaggaggaggaggaggatgatgaggaggaggaggaggaggag
cctgggagctcagaagagactgagagaccctcctcttctcacaccaagaggaagcctgct
gttacagccaagcacaccggagggaatgagtctgacacctcggacgagagtggacaggaa
gatggcgcctctgacaacccctcagatgataccactttgcaggagaggatagactgcacc
gcctgtggacagcaggtcaaccacttccagcgccactcagtgtttgagcacccgatgctc
catgtgctcctctgcaagtcgtgttataagtattacaccagcgatgacatcaataaagac
gaggacggcatggacgaacagtgcaggtggtgtgctgaaggtggcaacctgatctgctgt
gactactgccacaacgccttctgtaagaagtgcatcctgcgtaacctggggcgcaaggag
ctgtccatgatcaccgacgaggacagtaaatggtcctgctatatctgcagccctcagcct
ctctcagacatcgcctccaactgctccaacatcttgaccaagctggagagcttctggcgc
acgggatgcaagaaagagaggaaggaggtgaaagggcacagtaagggtaaaggtcaccac
caccatggtaaagctgtggtgaacggtaaggaacattcagacgggtcagggaccctcacc
ttctcctataagaccctgaaggtcctcaaggagctcgtgaagaggaccaagaagctgatt
gagacaaccacagggctcaacagcaccttcatccagcaggctgaggaggagcagggagca
ggaggaggtggcagcgggaccagacacctcaaggccttcaggtctgttctggctgatatg
aagaaggcccatgctgccctagaggaggacttggagtcacagttcacttcccaggaccag
gggatgcagaacggggatgctgtttccaacaccgacggccatgatggccacgatcagatt
gacaacatggttgatggacaggaggcagaagaggataaaatggccgacactgaggatggg
gaggagcatgggggcttgtcagaggacgcagagatggaggggagccccgcccccgcgcct
caggaccactcggacacagagacagacagccaggccaaagaccagacagcagtggaggag
gaggaggatggagaggaggaggagggtgaccggaaaaaagacattgtgtccgtcgggctg
gccgtccctgacgagctcttccaaatggtagagagtctggcggactccgcagggttaaag
cccggcaacgacgccatggaaaccaccgctgctagccaatccgagagccccgccgccgac
tcaaacaggaagtcacttgaaacccataaggagaaggccatgcccaaggtgaagaacctg
atcgtgaagctgacgcccgttccagtggttaccacacgcacctccaggtctatgagcaag
gataaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaaggatgga
ggcaaggagaagagtaaggaggaggtggagggaggtgggggctctgaggaggacagccgc
cgctccagccgcacaaagaccacacccctcaggaagtcaccggacgggaagaacaagatg
gctgaatcctctccggagaacagtgactcagagggcaagagtcccagcaggctgaagagt
agaaccaaaggcagctcggagaaggaacgtgaggaggaggaggaggaggagcagcagagc
aatgcctcatccaaggtgaccgctgatccttctaaacacgaagtggactctgacgaggtt
ctggacatcctgctccagactgcagcggcagaacacagctcggacgaggatgcgcagcag
gacgccgatggtaaccagggcaacaggagcttcaaaaggtgcctgttcaaactcagcaag
aaagatggagaggaggaggagaatgacaaggtgaagactgacaagaagctggcagccaaa
cgcaaactgaaagccgacgattcagacaactcagagtccgactcagacgaagacacgaag
aggaagaaaaagaagtcctcctcagcttctgccaaaaagacatccaagaagaagggctcg
gacggctcctctaactccgactcggacttagagatgaagggactcagccaactggcgacg
gggaaacggaggagcagccgtgtgaagaaggaaagagaggagaaggagaacaagggcgga
gatcggaggcggtcgtacgaactgaaacgcaaagccagaagtagaggagccaagcagcaa
gattcatcgtctgatgacaaggaggagggaggagggtctggagaggagagtggagaccag
cagaagattaaacccatcgtggaggagacgttggtagcagggaggggaaccttccaccag
tcctcaggagatgaaggtaaccatgacgcatctcagatggccgatgaggaggacgatgat
gatgatccagagaacagaattgccaagaagatgctggcccagatcaaggctaactactct
tcaggagcagaggagagctctgacgaggacggagaagagaaggaacagaagaaggagaag
ggaggagaggagcaggaggaggacaacgatgatgatgatgatgaagggggctctggctct
gatgtggacgtgaagacgagtgtggggcgtcaccaccggctgctccgccacaaactgacg
ctgtacgaagtggagtcgggagaggagaaggagaaaccagccagcaaggggaagaaggag
accaagaggaccagacggaaagtgggtagtgatgactcagcagacccagactttaaggag
tcagctagcagcagtgagtcaggagttagtgaggagatcagtgagaaggaatcgtggtca
gaggagtctgagtctgagaaggaaggcagtagacacaggaggaccacgcgctcctccgtg
aagaggaagaagaagaagaaggagaggagctacgctcagaagaagaaacggcgtcgcatc
aaggccctggattcttcatccgacgacaagagcgggtcaggagaggacggctcggggaag
gaggatggagacactcctaaaggacagaggaagaagatcagaaaaatcctcaaggacaac
gagctgaggacggaaacgagggatgccctgaaggaggagaggaggagacgcatcgctgag
agggagcagctcagggagaaactcagagagactctacatgtccctcccgaccaggtactc
gtggtggaggaggcgtccgccgtggcttgtccaatcacaaccaagctggtgctggatgaa
gacgaggagaccaaggagcccatggtgcaggttcaccgcaatctggtcactaagctcaaa
ccacaccaggtcgacggggtccagttcatgtgggactgctgttgtgagtcggtgaagaaa
accaacaagaactctggttctggatgtatcctggctcactgtatgggcctgggaaaaacg
ctgcaggtggtaaccctactccacacactactgctgtgtgaaaagttagacttctccacg
gctctgatcgtctgtcctctcaacaccgttctcaactggctcaatgagtttgagaagtgg
cagtacggcttcaaggacaaggagagtttagaggtgacggagctggccacggtgaagcgt
cctcaggagagagcgtctgctctgcagcagtggcaggaggatggaggaatcatgatcatt
ggctatgagatgtaccgtaacctcacacagggtagaaacatcaagagcaagaaactcaaa
gagaccttccagaagaccctggttgacccaggcccagactttgtgatctgtgatgagggc
cacatcttgaagaacgaggcgtcggacatctctaaagccatgaactccatcaagacgcga
aggagagtggtgctcaccggcacaccgctgcagaacaacctcatagagtgtatgtccgtt
acttcctgttatatccagaccgctggcctacagggcattcggaaataa
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