Oncorhynchus kisutch (coho salmon): 109885784
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Entry
109885784 CDS
T09179
Symbol
c1d
Name
(RefSeq) nuclear nucleic acid-binding protein C1D
KO
K12592
exosome complex protein LRP1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109885784 (c1d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109885784 (c1d)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109885784 (c1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sas10_Utp3
DUF2076
DUF932
Motif
Other DBs
NCBI-GeneID:
109885784
NCBI-ProteinID:
XP_020333179
Ensembl:
ENSOKIG00005041926
LinkDB
All DBs
Position
LG20:7965235..7970006
Genome browser
AA seq
204 aa
AA seq
DB search
MAEDIPVEDYPTEIEEQLTGFESSVGAVNNMVQTILSMPRNELVKKLDPLEQAKLDLMSA
YSLNSLFWMYLVTQGINPKEHAIKQELERIRTYMNRVKEITDRRKAARLDKAAASRFLRN
ALWKLEEGRSKDTPGCDAQDTPGRAPQHTPGRGQHRPDRGHRTPGRGQHRPDRGQHTPGR
GQRTPGRGQQKSFDGHQSKGPKLS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacatccctgtggaagactaccctactgagattgaggagcagctcacaggg
tttgagtcatcagtcggtgctgtcaacaacatggtgcaaaccatcctatccatgccaaga
aatgagctggtgaaaaaactggatcctctggaacaagccaagctagacctaatgtctgca
tatagcctcaactctcttttctggatgtacttggtcacacaaggaataaacccaaaagaa
catgcaatcaaacaagagttggagaggatcaggacgtatatgaaccgtgtgaaggagatc
actgacaggaggaaagcagcccgtctggacaaggcagcggcgtctcgcttcctcaggaac
gcattgtggaaacttgaggaagggaggtcaaaggacacgccgggttgtgacgctcaggac
acgccgggacgtgccccccagcacacaccaggtcgcggccagcacaggccagatcgcggc
caccgcacgccaggtcgcggccagcacaggccagatcgcggccaacacacgccaggtcgc
ggccaacgcacgccaggtcgcggccagcagaaaagctttgatggccatcagtcaaaagga
cccaaactcagctga
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